Pairwise Alignments

Query, 166 a.a., fimbrial protein from Escherichia coli ECRC98

Subject, 158 a.a., Minor fimbrial subunit StfF from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 72.8 bits (177), Expect = 3e-18
 Identities = 50/161 (31%), Positives = 82/161 (50%), Gaps = 16/161 (9%)

Query: 16  IVSTPVMAGSKSVA----MVLRVLVDAPPPCTVTG---ASVEFGNVFISKIDGVSYKRPI 68
           IV T +M GS +      +     + +PP CT+       V+FGN+ I+KIDG  Y + +
Sbjct: 4   IVLTMLMGGSLAAQAADNLKFHGTLISPPNCTINNDQTIDVKFGNLLINKIDGTRYAQNV 63

Query: 69  DYSLVCNNLAMDD---LRLNMQATTTVINGETVIDTGIAGFGIRIQKVSDHSILDLTPGA 125
            Y + C++   D+   + L +  + +  N    ++T +AG GI +++         T G+
Sbjct: 64  PYEITCDSTVRDETMAMTLTLSGSVSDFN-PAAVNTSVAGLGIELRQNDQ----PFTLGS 118

Query: 126 WLPFNFSSGALALEAVPVVQSGVSLTAAEFSASATIVVDYQ 166
            +  N  S    L+A+PV +SG SL    F A+AT+ VDYQ
Sbjct: 119 TITVNEQS-IPVLKAIPVKKSGASLKEGGFDATATLQVDYQ 158