Pairwise Alignments

Query, 187 a.a., fimbrial protein from Escherichia coli ECRC98

Subject, 192 a.a., fimbrial protein from Pseudomonas simiae WCS417

 Score = 45.8 bits (107), Expect = 5e-10
 Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 12/117 (10%)

Query: 5   VKTAIAATMVMGA-FASTSTIAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDMGDIGSGI 63
           VK  I   + +GA FA       G+ G     G++ ++PCS+        VD+  +    
Sbjct: 6   VKVLIGLLVSLGAPFAQADNDVEGSGGVLNITGSLYETPCSLAMASQHQTVDLDVVSRNE 65

Query: 64  LKNNG-TSTPKAFQIHLQDCVFDTQTTMTTTFTGNASSTNSGN-YYTIYNTDTGAAF 118
           LK+ G  + P AFQI LQDC             G+  S  SGN  ++ Y     A F
Sbjct: 66  LKHPGDQAMPMAFQIRLQDC---------RRTAGSIRSERSGNLVWSAYEPVLSATF 113