Pairwise Alignments

Query, 187 a.a., fimbrial protein from Escherichia coli ECRC98

Subject, 194 a.a., Putative fimbrial-like protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 75.1 bits (183), Expect = 7e-19
 Identities = 62/198 (31%), Positives = 90/198 (45%), Gaps = 18/198 (9%)

Query: 2   SKFVKTAIAATMVMGA--FASTSTIAAGNNGTAR--FYGTIEDSPCSIVPDDHKLEVDMG 57
           +K +    AA M+ GA  FA+ +T  AG  G+ +  F GTI +SPC I P D  + V  G
Sbjct: 3   NKIILAMAAAGMMYGASVFAADTTPTAGPFGSGKILFTGTITNSPCDIAPGDDAITVPFG 62

Query: 58  DIGSGILKN-NGTSTPKAFQIHLQDCVFDTQTTMTTTFTGNASSTNSGNYYTIYNTDTGA 116
            I    L   N T+  K F IHLQ+C FD      TT  G+A   +     T+  + T  
Sbjct: 63  QISYRKLNTANATTDSKPFTIHLQNCAFDPN---ETTIAGSAGKMSK---VTVSFSGTAD 116

Query: 117 AFNNVSLAIGDAQGTSYKSGAGIEQKIVN-DTATNKGKAKQ------TLDFKAWLVGAAD 169
                 ++ G AQ    +   G    ++  +T    G A+Q       L+F A L+   D
Sbjct: 117 TSGKAYVSTGSAQHVGVQLLKGDNTSLITPNTPMPDGDAQQLQAGNNELNFFARLIALTD 176

Query: 170 APDLGNFEANTTFQITYL 187
           A   G+  A+ T+ + YL
Sbjct: 177 AATPGDVNASVTYTLKYL 194