Pairwise Alignments

Query, 310 a.a., Inner membrane protein YfdC from Escherichia coli ECRC98

Subject, 298 a.a., putative inner membrane protein from Pseudomonas putida KT2440

 Score =  300 bits (769), Expect = 2e-86
 Identities = 152/270 (56%), Positives = 200/270 (74%), Gaps = 5/270 (1%)

Query: 19  EKERGKKIEIDEDR-----LPSRAMAIHEHIRQDGEKELERDAMALLWSAIAAGLSMGAS 73
           + E+   +  DE++      P RA  +HE IR  G++ELER   AL WSA+AAGLSMG S
Sbjct: 5   QSEKTPGLSADEEQEVSHSQPPRAAVLHEIIRYQGDQELERTLAALWWSALAAGLSMGLS 64

Query: 74  LLAKGIFHVELEGVPGSFLLENLGYTFGFIIVIMARQQLFTENTVTAVLPVMQKPTMSNV 133
           L+A G+F+  L    G+ ++ ++GY+ GF+ VI+ARQQLFTENT+TAVLPVM  PT++N 
Sbjct: 65  LMAMGLFYARLPEGAGAQVVASIGYSAGFLAVILARQQLFTENTLTAVLPVMTAPTLANF 124

Query: 134 GLLMRLWGVVLLGNILGTGIAAWAFEYMPIFNEETRDAFVKIGMDVMKNTPSEMFANAII 193
           G L+RLWGVVLLGN+ GT + AW    +PIF+ +T  AF+++G  VMKN  S+MFA  I+
Sbjct: 125 GRLLRLWGVVLLGNLAGTLLVAWVMLELPIFDSKTDVAFLEVGRKVMKNDISQMFAKGIV 184

Query: 194 SGWLIATMVWMFPAAGAAKIVVIILMTWLIALGDTTHIVVGSVEILYLVFNGTLHWSDFI 253
           SGW+IATMVWM P+   AKI +I+++T+L+ALGD THIVVGSVE+ YLV+ G   WS F 
Sbjct: 185 SGWMIATMVWMIPSMEHAKIWIILMITYLMALGDFTHIVVGSVEVSYLVWAGDETWSRFW 244

Query: 254 WPFALPTLAGNICGGTFIFALMSHAQIRND 283
             FALPTLAGNI GG+FIFAL+SHAQ+R+D
Sbjct: 245 LEFALPTLAGNIIGGSFIFALISHAQVRSD 274