Pairwise Alignments

Query, 285 a.a., HTH-type transcriptional regulator MurR from Escherichia coli ECRC98

Subject, 282 a.a., putative DNA-binding transcriptional regulator from Escherichia coli BL21

 Score =  161 bits (408), Expect = 1e-44
 Identities = 94/281 (33%), Positives = 158/281 (56%), Gaps = 3/281 (1%)

Query: 4   LTKIRNAESEFTENEQKIADFLRANVSELKSVSSRKMAKQLGISQSSIVKFAQKLGAQGF 63
           L +IR       ++++K+AD+L       + +SS+++A + G+SQSS+VKFAQKLG +GF
Sbjct: 4   LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63

Query: 64  TELRMALIGEYSASREKTNATAQHLHSSITSDDSLEVIARKLNREKELALEQTCALFDYA 123
             L++AL    ++  E  +     +H+ I  DD L ++  KL +E   A+  T  +    
Sbjct: 64  PALKLALSEALASQPESPSVP---IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120

Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGCDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183
           +L + + ++  A  I +TG+G S LV  + ++KLMKIG+  A   D H      QA    
Sbjct: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180

Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLAHFTLDTVSGETEWRSS 243
           D+ +AISY+G ++E+ L A+   + G  V+AIT    + L++ A   L T++ E    S+
Sbjct: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240

Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284
           S+S   AQ  +TDLLF+ L+Q +   + + I+ S  L ++L
Sbjct: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281