Pairwise Alignments

Query, 372 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Escherichia coli ECRC98

Subject, 428 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  176 bits (447), Expect = 8e-49
 Identities = 124/363 (34%), Positives = 189/363 (52%), Gaps = 52/363 (14%)

Query: 20  VPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVRVSVPTMDAAEAFKLIKQQ- 78
           V +G  AP+ VQSMTNT T D   T  Q+K L   G+++VR++V   +AA+A   I++Q 
Sbjct: 38  VTVGGDAPVRVQSMTNTDTADAVGTAIQVKELALAGSELVRITVNNDEAAKAVPYIREQL 97

Query: 79  ----VNVPLVADIHFDYRIALKVAEYGVDCL---RINPGNIGN----EERIRMVVDCARD 127
               +NVPL+ D H++    L       + L   RINPGN+G     + +   +V+ A  
Sbjct: 98  DRMGINVPLIGDFHYNGHRLLTDHPACAEALSKYRINPGNVGRGDKGDRQFAQMVEIAAR 157

Query: 128 KNIPIRIGVNAGSLEKDL-----QEKYGEPTP--------QALLESAMRHVDHLDR--LN 172
            +  IRIGVN GSL++DL      E     TP        +AL+ SA+      +   LN
Sbjct: 158 YDKAIRIGVNWGSLDQDLLARLMDENANRSTPWEARQVMYEALITSALESARKAEEIGLN 217

Query: 173 FDQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGI 232
            +   +S K S V   +  Y+ LA++ D  LHLG+TEAG    GAV SA  L +LL +GI
Sbjct: 218 GNNIVLSCKVSGVQDLIAVYQALAQRCDYALHLGLTEAGMGTKGAVASAAALSVLLQQGI 277

Query: 233 GDTLRVSLAADP----VEEIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALE 288
           GDT+RVSL   P     +E+ +  +IL++L +R+   +  ACP C R       T   L 
Sbjct: 278 GDTIRVSLTPQPGEARTQEVVIALEILQALGMRAFVPSVTACPGCGR---TTSTTFQELA 334

Query: 289 QRLEDI--------------ITPMDVSIIGCVVNGPGEALVSTLGV----TGGNKKSGLY 330
           ++++D               +  + V+++GC+VNGPGE+  + +G+    TG    + ++
Sbjct: 335 KQIDDYLRGSMPVWRARYPGVENLKVAVMGCIVNGPGESKHADIGISLPGTGEAPAAPIF 394

Query: 331 EDG 333
            DG
Sbjct: 395 IDG 397