Pairwise Alignments

Query, 245 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Escherichia coli ECRC98

Subject, 271 a.a., tRNA:Cm32/Um32 methyltransferase from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  156 bits (394), Expect = 5e-43
 Identities = 97/238 (40%), Positives = 134/238 (56%), Gaps = 9/238 (3%)

Query: 6   RIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPL---VKPDSQAIALAAGASDVIGNAHI 62
           R VL++TSH GN+G VARAMK MG  +L LV P    V    + I  A+GA+DV+  A I
Sbjct: 31  RFVLIQTSHAGNVGGVARAMKVMGFDDLVLVQPRWANVLRREETIQRASGANDVLAKARI 90

Query: 63  VDTLDEALAGCSLVVGTSARSRTLPWPMLDPRE--CGLKSVAEAANTPVALVFGRERVGL 120
           VDTLDEAL G S +  T+   R    P   PRE   GL    +  +  VA +FG ER G+
Sbjct: 91  VDTLDEALEGMSHLCATAMTPRDFGPPTRAPREHFAGLMGAGDPPDG-VAFLFGSERFGM 149

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
            NE++ +CH  ++I   P + SLNLA AVQ++AY+ R A    +     VE    P    
Sbjct: 150 RNEDVYRCHVALSIPTAPSFGSLNLAAAVQLVAYDWRQALGGFEAPAVAVER---PQADA 206

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
             L     HLE+ L+A  F+    P ++M +L +LF RA P  +E++ILRG+  ++ Q
Sbjct: 207 RALAGMLDHLERALVAVDFLDPEAPKKLMPRLNQLFNRAAPSDEEIHILRGVAKAMLQ 264