Pairwise Alignments

Query, 466 a.a., GABA permease from Escherichia coli ECRC98

Subject, 457 a.a., aromatic amino acid transporter (NCBI) from Escherichia coli BW25113

 Score =  294 bits (752), Expect = 5e-84
 Identities = 159/439 (36%), Positives = 246/439 (56%), Gaps = 12/439 (2%)

Query: 9   ELGGGLKSRHVTMLSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEM 68
           +L  GLK+RH+ ++++ G IG  LF+GS+  I  AGP ++L Y  AG +  +IMR L EM
Sbjct: 10  QLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEM 69

Query: 69  AVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFWVLVIPLEANIAAMILHSWVPGIPIWL 128
            V  P  GSFS +A K  G +AG+  GW YW  +VLV   E       +  W P IP W+
Sbjct: 70  VVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWV 129

Query: 129 FSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISGFYPYADVSG--- 185
            + V  + +   NL +VK +GE EFW A+ KVIA++A I  G     G+  ++   G   
Sbjct: 130 SAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFG-----GWLLFSGNGGPQA 184

Query: 186 -ISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWR 244
            +S LWD GGF+P+GF  ++  M I MFSF G E+V I AAE+D PE+ I +ATN VI+R
Sbjct: 185 TVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQVIYR 244

Query: 245 ISIFYLCSIFVVVALIPWNMPGLKAVGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSA 304
           I IFY+ S+ V+++L+PW          +  +   L        ++ V+L +  S  NS 
Sbjct: 245 ILIFYIGSLAVLLSLMPWTRV-TADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSC 303

Query: 305 LYTASRMLYSLSRRGDAPAVMGKINRSKTPYVAVLLSTGAAFLTVVVNYYAPAKVFKFLI 364
           +Y  SRML+ L+++G+AP  +  +++   P   +L+S     L V++NY AP   F  L+
Sbjct: 304 VYCNSRMLFGLAQQGNAPKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLM 363

Query: 365 DSSGAIALLVYLVIAVSQLRMRKILRAEGSEIRLRMWLYPWLTWLVIGFITFVLVVMLFR 424
               +  ++ + +I+++ ++ R+  + +G   R    LYP   W+ + F+  VLV+ML  
Sbjct: 364 ALVVSALVINWAMISLAHMKFRRAKQEQGVVTRFPALLYPLGNWICLLFMAAVLVIMLMT 423

Query: 425 PAQQLEV--ISTGLLAIGI 441
           P   + V  I   L+ +GI
Sbjct: 424 PGMAISVYLIPVWLIVLGI 442