Pairwise Alignments

Query, 506 a.a., aerotaxis sensor receptor Aer from Escherichia coli ECRC98

Subject, 554 a.a., methyl-accepting chemotaxis protein II from Erwinia amylovora T8

 Score =  238 bits (606), Expect = 5e-67
 Identities = 138/329 (41%), Positives = 203/329 (61%), Gaps = 9/329 (2%)

Query: 179 MLWFVAAPVVTYILCALVVLLASACFEWQ---IVRPIENVARQALKVATGERNSVEHLNR 235
           MLW +A       + ALV  L   C+      ++RP++        +A G+      +N 
Sbjct: 192 MLWAIAG------MMALVFALIVLCWFGLRNILIRPLQATIAHISSIAEGDLTQSIEVNG 245

Query: 236 SDELGLTLRAVGQLGLMCRWLINDVSSQVSSVRNGSETLAKGTDELNEHTQQTVDNVQQT 295
            +E+     +V  +       ++ V     ++  G+  ++ G ++L+  T+Q   +++QT
Sbjct: 246 YNEMAQLAGSVKNMQQALVKTVSVVRDGADAIYTGASEISSGNNDLSARTEQQAASLEQT 305

Query: 296 VATMNQMAASVKQNSATASAADKLSITASNAAVQGGEAMTTVIKTMDDIADSTQRIGTIT 355
            A+M Q+ A+VKQN+  A  A KL++ AS  A +GG+ +  V+KTM DIA S+++I  IT
Sbjct: 306 AASMEQLTATVKQNAENARQASKLALNASETAQKGGKVVDGVVKTMSDIAGSSKKIADIT 365

Query: 356 SLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSANAANDIRKLIDASA 415
           S+I+ IAFQTNILALNAAVEAARAGEQG+GFAVVAGEVR+LA RSA AA +I+ LID S 
Sbjct: 366 SVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKGLIDDSV 425

Query: 416 DKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQISHSTLEQADGLSSLTRAVDELNLITQ 475
            +V SGS  V  AG TM DIV  V  VT ++ +I+ ++ EQ+ G+  +  AV+E++ + Q
Sbjct: 426 ARVDSGSALVGTAGETMNDIVNAVTRVTDIMGEIASASDEQSRGIDQVGEAVNEMDRVIQ 485

Query: 476 KNAELVEESAQVSAMVKHRASRLEDAVTV 504
           +NA LVEESA  S  ++ +ASRL  AV V
Sbjct: 486 QNAALVEESASASTSLEEQASRLTQAVAV 514