Pairwise Alignments

Query, 402 a.a., DNA uptake porin HofQ from Escherichia coli ECRC98

Subject, 717 a.a., type IV pilus secretin PilQ from Ralstonia solanacearum PSI07

 Score =  228 bits (582), Expect = 3e-64
 Identities = 156/430 (36%), Positives = 242/430 (56%), Gaps = 47/430 (10%)

Query: 12  QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 71
           ++++L   ++ +  +LQ  A+   LN+V S  V+GT+SL L DVPW QALQ V+ S GL 
Sbjct: 292 ERMSLNFQNIDIRSLLQVFADFTNLNIVTSDSVTGTLSLRLKDVPWDQALQIVLDSKGLA 351

Query: 72  TRQEGNILSVHSIAWQNDNIARQEAEQARAQANLPLEN----------------RNITLQ 115
           +R+ GN+L V   A + +   +++AE    Q    LE                 RN+ L 
Sbjct: 352 SRRNGNVLWV---APRGELATKEKAELESQQQVTELEPLRSQVFRLNYQRADDVRNMLLG 408

Query: 116 YADAGELAKAG---EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVE 172
              AG  A AG    ++LS +GS+T D RTN+L + D  + L  ++ ++ ++D+PV QV 
Sbjct: 409 TGTAGGGAAAGGTASRILSKRGSLTSDARTNQLFVSDIPSKLEEVQAFLLKIDIPVRQVM 468

Query: 173 LSAHIVTINEKSLRELGVKWTLADAQHAGGVGQ--------VTTLGS-DLSVATATTHVG 223
           + A IV  ++   R LG K   A   +  G G         VTT G+ D S A +    G
Sbjct: 469 IEARIVEADDTFSRNLGAKLGFASKTNGAGYGNTYTNVVSPVTTNGTWDNSPALSFPANG 528

Query: 224 FN--------IGRIN---GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIP 272
            N        +   N   GR L LELSALE   +  II+SPR++ +    A I+QG+E+P
Sbjct: 529 INGVSAASVAVSLFNAGAGRFLALELSALEADGRGKIISSPRVVTADNIKALIEQGTELP 588

Query: 273 YQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAID 332
           YQ ++  SGATSV+F++A L +EVTP +   G + L + ++++  G   Q  +G   AI+
Sbjct: 589 YQAATS-SGATSVQFRKANLKLEVTPKITPDGNVFLDVDVNKDSVGT--QTTNG--FAIN 643

Query: 333 KQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVV 392
            + ++TQV V++G T+ +GGI+T+  ++  + VPLLGDIP  G LF+   K ++R EL+V
Sbjct: 644 TKHVQTQVLVENGGTVVIGGIYTQNERTDVNKVPLLGDIPVLGNLFKSTAKTNDRTELLV 703

Query: 393 FITPRLVSSE 402
           F+TPR++S +
Sbjct: 704 FLTPRVLSDQ 713