Pairwise Alignments

Query, 402 a.a., DNA uptake porin HofQ from Escherichia coli ECRC98

Subject, 694 a.a., Type IV pilus biogenesis protein PilQ from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  199 bits (507), Expect = 2e-55
 Identities = 133/429 (31%), Positives = 228/429 (53%), Gaps = 50/429 (11%)

Query: 12  QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 71
           +K++L   ++ V  +LQ +A+    N+V S  V+G V+L L DVPW QAL  ++++ GL 
Sbjct: 269 EKLSLNFQNIEVRSLLQVIADFTNFNIVTSDSVTGAVTLRLKDVPWDQALDIILQAKGLG 328

Query: 72  TRQEGNILSVHSIAWQNDNIARQEAEQARAQANLP----LENRNITLQYADAGELA---- 123
            R+ GN+L +       D IA +E ++  ++ ++     L  +   + YA A ++A    
Sbjct: 329 MRKSGNVLWIAP----KDEIAAREKQELESKVSIESLETLRTQGFQMNYAKAADIATQLT 384

Query: 124 --------KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSA 175
                       ++LS +GS+  + RTN+L + D  + L  +++ + ++D+P+ QV + A
Sbjct: 385 STGSGGSGSTSARILSDRGSVISEPRTNQLFVTDIASRLEQVQELIRKLDIPIRQVMIEA 444

Query: 176 HIVTINEKSLRELGVKWTLA----DAQHAGGVGQVTTLGSDLSVATA------------- 218
            IV  ++   + LGV+        +A  A G       GS+   AT              
Sbjct: 445 RIVEADDTFGKSLGVRLGGGVRGFNAGSANGNPIQGNFGSNYGAATTGPTLTSAPFVNLP 504

Query: 219 -----TTHVGFNIGRIN---GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSE 270
                     F +   N    R L LE+SALE   +  I++SPR++ +    A I+QG+E
Sbjct: 505 ANPSTAQAASFALSLFNPSASRFLSLEISALESDGKGRIVSSPRVVTADQVKALIEQGTE 564

Query: 271 IPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLA 330
            PYQ ++  SGAT++ F++A L +EVTP +  +G I L L I+++  G+     DG  +A
Sbjct: 565 FPYQTATS-SGATAIAFRKANLKLEVTPQITPEGNIILDLDINKDSRGE--STPDG--IA 619

Query: 331 IDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERREL 390
           I+ + ++TQV V++G T+ +GGIF +  +   + VPLLGD+P  G LF+   +   + EL
Sbjct: 620 INTKHVQTQVLVENGGTVVIGGIFEQTERDEVNKVPLLGDLPAVGNLFKSRNRIANKSEL 679

Query: 391 VVFITPRLV 399
           ++FITPR++
Sbjct: 680 LIFITPRVL 688