Pairwise Alignments

Query, 421 a.a., Inner membrane protein YihN from Escherichia coli ECRC98

Subject, 425 a.a., putative MFS transporter, inner membrane protein from Escherichia coli BL21

 Score =  166 bits (420), Expect = 1e-45
 Identities = 100/383 (26%), Positives = 187/383 (48%), Gaps = 3/383 (0%)

Query: 5   KKWALFSLLTLCGGTIYKLPSLKDAFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSI 64
           ++W   ++++  GG  + L  L+  + IPM ++   +N +IG  MS       + +  S 
Sbjct: 7   RRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSG 66

Query: 65  YFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDMMNWPVLLKSVSR 124
             ADK   R  ++ ++I TGLLG+ + T P  W +L +   F +T  +M W V +K+ S 
Sbjct: 67  VIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQIAFAITTILMLWSVSIKAASL 126

Query: 125 LGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFG-SGLLGFKAGIWFYSLIVIAVGI 183
           LG+  +QG++ G+ E  RG+    +A   + VF+ F        K  I  YS++ I +GI
Sbjct: 127 LGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGI 186

Query: 184 TIFFVLNDKEEAPSVEVKKEDGASQNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIP 243
             +F ++D     S    +E  + Q + + +VL+  T W  +  +F V+ +Y  L++   
Sbjct: 187 LCWFFVSDNNNLRSAN-NEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTN 245

Query: 244 FLKNIYLLPVALVGAYGIINQYCLKMIGGPIGGMISD-KILKSPSKYLCYTFIISTAALV 302
           +L  +Y + +      GI+     + + GP+GG+I+    +KSP++ +    ++    L 
Sbjct: 246 YLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLTLT 305

Query: 303 LLIMLPHESMPVYLGMACTLGFGAIVFTQRAVFFAPIGEAKIAENKTGAAMALGSFIGYA 362
            L++       V +G+   L  G   +  R +++A  GEA+      G  + + S IG+ 
Sbjct: 306 ALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFL 365

Query: 363 PAMFCFSLYGYILDLNPGIIGYK 385
           P +F + + G+  D  P    Y+
Sbjct: 366 PDVFVYPIIGHWQDTLPAAEAYR 388