Pairwise Alignments

Query, 278 a.a., HTH-type transcriptional activator RhaS from Escherichia coli ECRC98

Subject, 278 a.a., transcriptional activator of rhaBAD and rhaT from Escherichia coli BL21

 Score =  568 bits (1465), Expect = e-167
 Identities = 276/278 (99%), Positives = 276/278 (99%)

Query: 1   MTVLHSVDFFPSGNASVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGG 60
           MTVLHSVDFFPSGN SVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGG
Sbjct: 1   MTVLHSVDFFPSGNVSVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGG 60

Query: 61  TVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLLPQELDGQYPSHWRVNHSV 120
           TVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLLPQELDGQYPSHWRVNHSV
Sbjct: 61  TVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLLPQELDGQYPSHWRVNHSV 120

Query: 121 LQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKSSLQENLENSASRLNLLLAWL 180
           LQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKSSLQENLENSASRLNLLLAWL
Sbjct: 121 LQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKSSLQENLENSASRLNLLLAWL 180

Query: 181 EDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLRHSEASVT 240
           EDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLRHSEASVT
Sbjct: 181 EDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLRHSEASVT 240

Query: 241 DIAYHCGFSDSNHFSTLFRREFNWSPRDIRQGRDGFLQ 278
           DIAY CGFSDSNHFSTLFRREFNWSPRDIRQGRDGFLQ
Sbjct: 241 DIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGFLQ 278