Pairwise Alignments

Query, 732 a.a., primosomal protein N' from Escherichia coli ECRC98

Subject, 739 a.a., primosomal protein N' from Pseudomonas simiae WCS417

 Score =  685 bits (1768), Expect = 0.0
 Identities = 368/738 (49%), Positives = 483/738 (65%), Gaps = 14/738 (1%)

Query: 3   VAHVALPVPLPRTFDYLLPEGMA---VKAGCRVRVPFGKQQERIGVVVSVSDVSELPLNE 59
           +  +ALP PL R FDY  P G+    ++ G RVR PFG++ E IG++V V+D SE+P  +
Sbjct: 5   ILRLALPSPLRRLFDYRAPAGVLRAQLQPGMRVRAPFGRR-EMIGILVEVADHSEVPAEK 63

Query: 60  LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119
           LK  + +LD+ P    ++++L LW A YY H +GD L  ALP+LLRQG  A      +W 
Sbjct: 64  LKPALAMLDATPPLPPALFKLCLWTAQYYQHSLGDTLSWALPVLLRQGELAEARQERFW- 122

Query: 120 ATEQGHAVDLNSLKRSPKQQQALAALRQGK--IWRDQVATLEFNDAALQALRKKGLC--D 175
           +   G  +D   + R+P+Q++ALA L Q    +    ++ L  +  +L  L  KGL   +
Sbjct: 123 SMVPGARLDDPRIARAPRQREALATLAQHPHGVAHQLLSKLMLSKDSLDLLLAKGLVQVE 182

Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYL 235
           +    P   D R  + ++   L LN EQ  A  AI +  D+F A+LLAGVTGSGKTEVYL
Sbjct: 183 IRKHAP---DARHEHWLAQPELPLNPEQRAAYEAIRAGFDSFHAFLLAGVTGSGKTEVYL 239

Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG 295
            ++   L  GKQALV++PEI L PQT+ARF +RFNA + ++HS +ND ERL +WL A++G
Sbjct: 240 QLIRETLQAGKQALVLIPEINLGPQTLARFEQRFNARIALVHSAVNDRERLESWLAARDG 299

Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355
           EA I+IGTRSALFTP KN G+I+IDEEHD SYKQQEG RYHARDLA+ RA  E IPI+LG
Sbjct: 300 EADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQEDIPIVLG 359

Query: 356 SATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHL 415
           SATP+LE+L N    +Y LLRL  RAG A+      LD+K + + +G++  +   + Q L
Sbjct: 360 SATPSLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTL 419

Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQQHLRCHHCDSQRPVPRQ 475
            A  QV++FLNRRGFAP LLCHDCGW++EC RCD   T+HQ    LRCHHC     VPR 
Sbjct: 420 AAGQQVLVFLNRRGFAPTLLCHDCGWMSECERCDARMTVHQRYGELRCHHCGHVERVPRH 479

Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535
           CP CG   L PVG GTE+ E+ L  LFP  P+ R+DRD+TSRK A+ Q  A + +G   I
Sbjct: 480 CPQCGKVDLRPVGAGTERAEERLGILFPDYPVLRVDRDSTSRKDAMNQLFATIQKGHPCI 539

Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595
           LIGTQMLAKGHHFP VTLV++LD DG LFS DFR++ER AQL  QVAGRAGRA + G V+
Sbjct: 540 LIGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGRVI 599

Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655
           +QTH  +HPLL  L  +GY AFAEQAL+ERR   LPP++   ++RAE H    A  FL +
Sbjct: 600 IQTHLADHPLLIQLTEQGYFAFAEQALSERRAAGLPPFSHLALLRAEAHKPGQAEGFLDE 659

Query: 656 LRNLI--LSSPLADDKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALIN 713
             +    L   L    + +LGPVPA   +R GR+R Q+LLQ  SR  L  +++  L  + 
Sbjct: 660 ACSAAERLLGELGLSGIELLGPVPAPMERRAGRYRAQLLLQATSRAPLHRLLSSWLLALE 719

Query: 714 TIPDSRKVKWVLDVDPIE 731
            +P  R+V+W LDVDP++
Sbjct: 720 QMPSGRQVRWSLDVDPVD 737