Pairwise Alignments

Query, 444 a.a., cadaverine/lysine antiporter from Escherichia coli ECRC98

Subject, 439 a.a., putrescine/proton symporter: putrescine/ornithine antiporter (NCBI) from Escherichia coli BW25113

 Score =  221 bits (564), Expect = 3e-62
 Identities = 137/434 (31%), Positives = 223/434 (51%), Gaps = 30/434 (6%)

Query: 1   MSSAK--KIGLFACTGVVAGNMMGSGIALLPANLASIGGIAIWGWIISIIGAMSLAYVYA 58
           MS AK  K+G+   T +   NMMGSGI +LP  LA +G I+I  W+++ +G+M+LA+ +A
Sbjct: 1   MSQAKSNKMGVVQLTILTMVNMMGSGIIMLPTKLAEVGTISIISWLVTAVGSMALAWAFA 60

Query: 59  RLATKNPQQGGPIAYAGEISPAFG----FQTGVLYYHANWIGNLAIGITAVSYLSTFFPV 114
           +    + + GG   YA     AFG    F     Y  +  I N+AI I+AV Y +     
Sbjct: 61  KCGMFSRKSGGMGGYA---EYAFGKSGNFMANYTYGVSLLIANVAIAISAVGYGTELLGA 117

Query: 115 LNDPVPAGIACIAIVWVFTFVNMLGGTWVSRLTTIGLVLVLIPVVMTAIVGWHWFDAATY 174
              PV  G+A I ++W+ T  N  G     ++++I +  V+IPVV   I+GW WF    Y
Sbjct: 118 SLSPVQIGLATIGVLWICTVANFGGARITGQISSITVWGVIIPVVGLCIIGWFWFSPTLY 177

Query: 175 AANWNTADTTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIV 234
             +WN        A+  SI + LWAF+G+ESA  +T +V+NP+R VP+A + GT  A ++
Sbjct: 178 VDSWNPHHAPFFSAVGSSIAMTLWAFLGLESACANTDVVENPERNVPIAVLGGTLGAAVI 237

Query: 235 YIAATQVLSGMYPSSVMAASGAPFAISASTILGNWAAPLVSAFTAFACLTSLGSWMMLVG 294
           YI +T V++G+ P+  +A S APF ++ + +       ++ A    +C  SL  W   + 
Sbjct: 238 YIVSTNVIAGIVPNMELANSTAPFGLAFAQMFTPEVGKVIMALMVMSCCGSLLGWQFTIA 297

Query: 295 QAGVRAANDGNFPKVYGEVDSNGIPKKGLLLAAVKMT--ALMILITLMNSAGGKASDLFG 352
           Q    ++++G FPK++  V     P +G+L   +  +  ALM +   +NS        F 
Sbjct: 298 QVFKSSSDEGYFPKIFSRVTKVDAPVQGMLTIVIIQSGLALMTISPSLNSQ-------FN 350

Query: 353 ELTGIAVLLTMLPYFYSCVDLIRFEGV--------NIRNFVSLICSVLGCVFCFIALMGA 404
            L  +AV+  ++PY  S   L+  + V         + NFV+ +    G ++ F AL  +
Sbjct: 351 VLVNLAVVTNIIPYILSMAALVIIQKVANVPPSKAKVANFVAFV----GAMYSFYALYSS 406

Query: 405 SSFELAGTFIVSLI 418
               +    IV+ +
Sbjct: 407 GEEAMLYGSIVTFL 420