Pairwise Alignments

Query, 457 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase from Escherichia coli ECRC98

Subject, 481 a.a., UDP-N-acetylmuramate--alanine ligase from Pseudomonas simiae WCS417

 Score =  153 bits (387), Expect = 1e-41
 Identities = 131/467 (28%), Positives = 219/467 (46%), Gaps = 38/467 (8%)

Query: 2   RIHILGICGTFMGGLAMLARQLGHEVTGSDANVYPPMSTLLEKQGIELIQGYDASQLDPQ 61
           RIH +GI G  M G+A +   LG++V+GSD     P++  L+  G ++  G+ A     +
Sbjct: 18  RIHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKE-SPVTERLKTFGAQIFIGHRAENA-AE 75

Query: 62  PDLVIIGNAMTRGNPCVEAVLEKNIPYMSGPQWLHDFVLRDRWVLAVAGTHGKTTTAGMA 121
            D++++ +A+   NP V   LE+ IP +   + L + ++R R  +AVAGTHGKTTT  + 
Sbjct: 76  ADVLVVSSAVNTSNPEVATALERRIPVVPRAEMLAE-LMRYRHGIAVAGTHGKTTTTSLI 134

Query: 122 TWILEQCGYKPGFVIGGVPGNFEVSARLGESDFFVIEADEYDCAFFDKRSKFVHYCPRTL 181
             +    G  P FVIGG       +A+LG S + + EADE D       + F+H  P   
Sbjct: 135 ASVFAAGGLDPTFVIGGRLNAAGTNAQLGTSRYLIAEADESD-------ASFLHLQPLVA 187

Query: 182 ILNNLEFDHADIFD-DLKAIQKQFHHLVRIVPGQGRIIWPENDINLKQTMAMGCWSEQEL 240
           ++ N++ DH   +D D   ++K F   +  +P  G  +   +D  +++ + +    ++  
Sbjct: 188 VVTNIDEDHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPL---VKRPT 244

Query: 241 V----GEQGHWQAKKLTTDASE--WEVLLDGEKVGEVKWSLVGEHNMHNGLMAIAAARHV 294
           V     E    +A  +  +  +  + VL    +  +V  ++ G HN+ N L  I  A   
Sbjct: 245 VTYGFSEDADVRAINVRQEGMQTFFTVLRPDREPLDVSVNMPGNHNVLNSLATICIATDE 304

Query: 295 GVAPADAANALGSFINARRRLELRG----EANGVTVYDDFAHHPTAILATLAALRGKVGG 350
           GV+       L  F    RR ++ G    +   V + DD+ HHPT + A + A+RG    
Sbjct: 305 GVSDEAIVEGLSRFAGVGRRFQVYGQLPVDGGDVMLVDDYGHHPTEVAAVIKAVRGG-WP 363

Query: 351 TARIIAVLEPRSNTMKMGICKDDLAPSLGRADEVFLLQ--PA-HIPWQVAEVAEAC---- 403
             R++ V +P   +    +  DD    L  A+ + L++  PA   P   A+  + C    
Sbjct: 364 ERRLVMVYQPHRYSRTRDL-YDDFVNVLADANVLLLMEVYPAGEEPIPGADSRKLCNSIR 422

Query: 404 ----VQPAHWSGDVDTLADMVVKTAQPGDHILVMSNGGFGGIHQKLL 446
               + P +    VD LA +V    + GD +L    G  GG+  KLL
Sbjct: 423 QRGQLDPIYIERGVD-LAPIVKPLLRAGDILLCQGAGDIGGLAPKLL 468