Pairwise Alignments

Query, 457 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase from Escherichia coli ECRC98

Subject, 461 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  476 bits (1226), Expect = e-139
 Identities = 254/463 (54%), Positives = 307/463 (66%), Gaps = 18/463 (3%)

Query: 1   MRIHILGICGTFMGGLAMLARQLGHEVTGSDANVYPPMSTLLEKQGIELIQGYDASQLDP 60
           M IHILGICGTFMGG+A LAR+ GH VTG DA VYPPMS  L   GI+LI+G+ A QL  
Sbjct: 1   MHIHILGICGTFMGGVAALAREAGHRVTGCDAGVYPPMSDQLRALGIDLIEGFGADQLAL 60

Query: 61  QPDLVIIGNAMTRGN--------PCVEAVLEKNIPYMSGPQWLHDFVLRDRWVLAVAGTH 112
           +PD+ ++GN ++R          P +EA+++    Y SGPQWL + VL+ R V+AVAGTH
Sbjct: 61  RPDMFVVGNVVSRARLADGTPKFPLMEAIMDSGAAYTSGPQWLAEHVLQGRHVMAVAGTH 120

Query: 113 GKTTTAGMATWILEQCGYKPGFVIGGVPGNFEVSARLGESDFFVIEADEYDCAFFDKRSK 172
           GKTTT GM TWILE  G +PGF+IGGVP NF VSARLG+   F IEADEYD AFFDKRSK
Sbjct: 121 GKTTTTGMLTWILEANGLQPGFLIGGVPMNFGVSARLGQGQTFTIEADEYDTAFFDKRSK 180

Query: 173 FVHYCPRTLILNNLEFDHADIFDDLKAIQKQFHHLVRIVPGQGRIIWPENDINLKQTMAM 232
           FVHY PRT ILNNLEFDHADIFDDL AI++QFHHL+R VPG GR++    + +L++ +  
Sbjct: 181 FVHYRPRTAILNNLEFDHADIFDDLAAIERQFHHLIRTVPGNGRVVVNGLEESLERVLHK 240

Query: 233 GCWSEQELVGEQ-GHWQAKKLTTDASEWEVLLDGEKVGEVKWSLVGEHNMHNGLMAIAAA 291
           G WSE    G     + A+    +   ++VL  G+  G V+W+L G HN  NGL AIAAA
Sbjct: 241 GLWSELRSFGAAVSDFTAQ---GEPHAFDVLHQGQPAGRVEWALTGVHNQLNGLAAIAAA 297

Query: 292 RHVGVAPADAANALGSFINARRRLELRG----EANGVTVYDDFAHHPTAILATLAALRGK 347
            HVGVAPADAA AL +F N RRR+E+RG        +TVYDDFAHHPTAI  TL  L+ K
Sbjct: 298 EHVGVAPADAARALSNFENVRRRMEVRGTVPRAGGAITVYDDFAHHPTAIRTTLDGLQRK 357

Query: 348 VG-GTARIIAVLEPRSNTMKMGICKDDLAPSLGRADEVFLLQPAHIPWQVAEVAEACVQP 406
           +G    RI+AV EPRSNTMK+G  K  L  SL  AD  F      + W  AE        
Sbjct: 358 LGQPRGRILAVFEPRSNTMKLGTMKSQLPWSLEAADLAF-CHSGGLDWDAAEALAPMGAR 416

Query: 407 AHWSGDVDTLADMVVKTAQPGDHILVMSNGGFGGIHQKLLDGL 449
           A    ++D L   V   AQ GDHI+ MSNGGFGG+H +LL  L
Sbjct: 417 AQVGRNIDELVAQVTAAAQAGDHIVCMSNGGFGGVHDRLLKAL 459