Pairwise Alignments

Query, 457 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase from Escherichia coli ECRC98

Subject, 469 a.a., UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  145 bits (366), Expect = 3e-39
 Identities = 128/477 (26%), Positives = 218/477 (45%), Gaps = 39/477 (8%)

Query: 3   IHILGICGTFMGGLAMLARQLGHEVTGSDANVYPPMSTLLEKQGIELIQGYDASQLDPQP 62
           IH +GI G  M G+A +    G+ ++GSD      ++  L   G ++  G+DA+ ++   
Sbjct: 8   IHFVGIGGAGMSGIAEVLLNQGYRISGSDLGE-STVTRRLVALGAQVFVGHDAANIEGA- 65

Query: 63  DLVIIGNAMTRGNPCVEAVLEKNIPYMSGPQWLHDFVLRDRWVLAVAGTHGKTTTAGMAT 122
           D ++   A+   NP V A   K +P +     L + ++R +  +A+AGTHGKTTT  +  
Sbjct: 66  DAIVTSTAVKPDNPEVVAAHAKLVPVVPRAVMLAE-LMRMKKGVAIAGTHGKTTTTSLVA 124

Query: 123 WILEQCGYKPGFVIGGVPGNFEVSARLGESDFFVIEADEYDCAFFDKRSKFVHYCPRTLI 182
            +L      P FVIGG   +   +A+LG  ++ V+EADE D       + F++  P   +
Sbjct: 125 SVLAAAQLDPTFVIGGRLNSAGANAQLGSGEYIVVEADESD-------ASFLNLLPVLSV 177

Query: 183 LNNLEFDHADIF-DDLKAIQKQFHHLVRIVPGQGRIIWPENDINLKQTMAMGCWSEQELV 241
           + N++ DH D +  D   ++  F   +  +P  G  +   +D  +++ +           
Sbjct: 178 VTNIDADHMDTYGHDFGNLKAAFVDFLHKMPFYGAAVVCVDDAAIREILPQ-IARPITSY 236

Query: 242 GEQGHWQAKKLTTDASEWEVLLDGEKVG-------EVKWSLVGEHNMHNGLMAIAAARHV 294
           G     Q + +   A + ++    ++         +V  +L G HN+ N L AI  A  +
Sbjct: 237 GFSEDAQVRAINVRAVDTQMHFTVQRRNGVELPDLDVVLNLPGNHNVLNALAAIGIAVEL 296

Query: 295 GVAPADAANALGSFINARRRLELRGEA-----NGVTVYDDFAHHPTAILATLAALRGKVG 349
            V       AL  F    RR +  GEA        TV DD+ HHP  + ATL+A RG   
Sbjct: 297 NVPDEAVQRALAEFKGVGRRFQRYGEAALPSGGTCTVVDDYGHHPVEMAATLSAARGAYP 356

Query: 350 GTARIIAVLEPRSNTMKMGICKDDLAPSLGRADEVFLLQ---PAHIPWQVAE---VAEAC 403
           G  R++   +P   T +   C +D    +G+AD V L +       P   A+   +A A 
Sbjct: 357 G-RRLVLAFQPHRYT-RTRDCFEDFVKVIGQADAVLLAEVYAAGEAPIVAADGRSLARAL 414

Query: 404 -----VQPAHWSGDVDTLADMVVKTAQPGDHILVMSNGGFGGIHQKLLDGLAKKAEA 455
                ++P  +  D+  +   V+  A+ GD +L M  G  G +  ++++ LA+ A A
Sbjct: 415 RVAGKLEPV-FVDDIAAMPQAVLDNARDGDVVLCMGAGTVGAVAGRVIE-LAQGAHA 469