Pairwise Alignments

Query, 183 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Escherichia coli ECRC98

Subject, 276 a.a., predicted amidase and lipoprotein (NCBI) from Escherichia coli BW25113

 Score = 77.0 bits (188), Expect = 3e-19
 Identities = 50/123 (40%), Positives = 65/123 (52%), Gaps = 16/123 (13%)

Query: 65  AEIAHLRVSAHCLI-----RRDGE--IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL 117
           A +   +VS+H L+     R +G+  I Q VP  + AWHAG+S ++G  R ND SIGIEL
Sbjct: 61  ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL 120

Query: 118 E--------GTDTLA-YTDAQYQQLAAVTRALIDCYPDIANNMTGHCDIAPDRKTDPGPA 168
           E        G    A +  AQ Q L  + + +I  Y     N+  H DIAP RK DPGP 
Sbjct: 121 ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPL 180

Query: 169 FDW 171
           F W
Sbjct: 181 FPW 183