Pairwise Alignments

Query, 385 a.a., DNA-binding transcriptional regulator CdaR from Escherichia coli ECRC98

Subject, 389 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  229 bits (585), Expect = 8e-65
 Identities = 146/385 (37%), Positives = 216/385 (56%), Gaps = 28/385 (7%)

Query: 2   AGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVV 61
           A + LD  +AQDIV R M I+  N+NVMD++G I+GSG+ ERI   HEGA LVL+ GR+V
Sbjct: 24  AMFELDHDLAQDIVDRAMAILPCNVNVMDSQGLILGSGEPERINTRHEGAQLVLANGRIV 83

Query: 62  DIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRL 121
           ++D   A+ L GV+ G+NLPL L+G ++GV+GLTG+P+ +R YGELV MTAEM+L Q  L
Sbjct: 84  ELDTDAAKCLKGVQPGVNLPLMLDGRLMGVLGLTGDPQQVRTYGELVRMTAEMLLAQRNL 143

Query: 122 MHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSA 181
                   +  ++L+  L+    N+P L + A++LG+    PR+  + E+ SG      A
Sbjct: 144 QADQQWRRQRCDDLLALLLGGSGNSPRLLDEARQLGLKPQLPRIPCLFEITSGPPAEALA 203

Query: 182 MAELQQLQNA-LTTPERNNLV----AIVSLTEMVVLKPALNSFGRWDVEDHRKRVEQLIT 236
              + +  ++   +P R +L+    A V+L E+ +L+  L   G WD+E           
Sbjct: 204 AWLMSRYPDSWCVSPARQSLLWCRPAGVALDELRLLE-RLQRHG-WDIE----------- 250

Query: 237 RMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLD 296
                     R++LG+       + R YR  +  +  G++ +P  R    Q   LP LL 
Sbjct: 251 ----------RLALGSAAQSLEQLRRGYRRVRDLLAYGREVLPSERLLSLQRYRLPALLW 300

Query: 297 SLRGDWQANELARPLARLKAMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLN 356
             R D   +EL  PL R++A D++G L  TL AW  H+ Q  + + AL IHRN+L YRL 
Sbjct: 301 RHRNDDALDELLEPLQRIRAKDSSGQLLATLRAWCAHDGQSQSCADALGIHRNSLRYRLE 360

Query: 357 RISELTGLDLGNFDDRLLLYVALQL 381
           RI+EL  +D    +  L LY+ LQL
Sbjct: 361 RIAELGEVDPLRLEGMLSLYLGLQL 385