Pairwise Alignments

Query, 377 a.a., putative multidrug ABC transporter permease YbhS from Escherichia coli ECRC98

Subject, 911 a.a., fused ribosome-associated ATPase: ATP-binding protein/ATP-binding protein/predicted membrane protein (NCBI) from Escherichia coli BW25113

 Score =  169 bits (429), Expect = 2e-46
 Identities = 107/338 (31%), Positives = 182/338 (53%), Gaps = 4/338 (1%)

Query: 7   SWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQRSEA 66
           S RR+ +   +E  ++ RDP    +A++  ++L+ I GYGI++D   LR  +L   ++ +
Sbjct: 539 SLRRLFSYSRREALELRRDPVRSTLALMGTVILMLIMGYGISMDVENLRFAVLDRDQTVS 598

Query: 67  ALDFTHTMTGSPY-IDATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERANATAPIQV 125
           +  +T  ++GS Y I+     +  EL  +M+AG I   + IP +F   + R      + V
Sbjct: 599 SQAWTLNLSGSRYFIEQPPLTSYDELDRRMRAGDITVAIEIPPNFGRDIARGTPVE-LGV 657

Query: 126 ITDGSEPNTANFVQGYVEGIWQIWQMQRA--EDNGQTFEPLIDVQTRYWFNPAAISQHFI 183
             DG+ P+ A  V+GYV+ + Q W    A  +    +   L++++TRY +NP   S   I
Sbjct: 658 WIDGAMPSRAETVKGYVQAMHQSWLQDVASRQSTPASQSGLMNIETRYRYNPDVKSLPAI 717

Query: 184 IPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGMLAML 243
           +P  + +++ +I ++L++L V RE E G++  L  T  TR+E LL K +PY  LGML   
Sbjct: 718 VPAVIPLLLMMIPSMLSALSVVREKELGSIINLYVTPTTRSEFLLGKQLPYIALGMLNFF 777

Query: 244 LCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLP 303
           L   +SVF+ GVP++GS L L   + L+++   GMGLLIST  ++Q  A         +P
Sbjct: 778 LLCGLSVFVFGVPHKGSFLTLTLAALLYIIIATGMGLLISTFMKSQIAAIFGTAIITLIP 837

Query: 304 SIMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLF 341
           +   SG I  + S+    R +  + P  +F++  +  F
Sbjct: 838 ATQFSGMIDPVASLEGPGRWIGEVYPTSHFLTIARGTF 875