Pairwise Alignments

Query, 377 a.a., putative multidrug ABC transporter permease YbhS from Escherichia coli ECRC98

Subject, 925 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  162 bits (409), Expect = 5e-44
 Identities = 110/367 (29%), Positives = 185/367 (50%), Gaps = 14/367 (3%)

Query: 9   RRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQRSEAAL 68
           RR+ +   +E  ++ RDP    +AV+  ++L+F+ GYGINLD   L   +L    S  + 
Sbjct: 555 RRMFSYTRREALELQRDPIRGTLAVLGSVILMFVIGYGINLDVEDLSFAVLDRDDSTISR 614

Query: 69  DFTHTMTGSPY-IDATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERANATAPIQVIT 127
           D+   + GS Y I+     +  ++  +M+ G++   + IP  F   + R   T  +    
Sbjct: 615 DYVLDIAGSRYFIEKEPIRDYADMDRRMRDGELSLAIEIPPGFGRDVLRGK-TVEVGAWI 673

Query: 128 DGSEPNTANFVQGYVEGIWQIWQMQRAED---NGQTFEPLIDVQTRYWFNPAAISQHFII 184
           DG+ P  A  V+GYV+G+ Q W  ++A +   N  T +    ++TRY +NP   S   ++
Sbjct: 674 DGAMPQRAETVRGYVQGMHQTWLARKASEIYGNAAT-QSSFSIETRYRYNPDVKSLVAMV 732

Query: 185 PGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGMLAMLL 244
           P  + +++ +I A+L +L V RE E G++  L  T  TR E L+ K +PY  LGML  LL
Sbjct: 733 PAVIPLLLMLIPAMLAALSVVREKELGSIVNLYVTPTTRLEFLIGKQLPYVALGMLNFLL 792

Query: 245 CMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPS 304
               ++FI  VP+ GS L     + LF++    +GL++S+  ++Q  A         +P+
Sbjct: 793 LTAFAIFIFQVPFTGSYLAYATGALLFVIIATSIGLVMSSFMKSQIAAIFGTALLTLIPA 852

Query: 305 IMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLF--------LAGNIPVVLVVNVLF 356
              SG I  + S+      +  I PA YF++  +  F        L+G+   +L+   L 
Sbjct: 853 TQYSGMIDPVSSLQGAGAFIGNIYPATYFMTISRGTFSKGLDFAGLSGSFLPLLIAIPLL 912

Query: 357 LIASAVM 363
           LIA A +
Sbjct: 913 LIAGAAL 919