Pairwise Alignments

Query, 307 a.a., Uncharacterized HTH-type transcriptional regulator YdcI from Escherichia coli ECRC98

Subject, 318 a.a., Transcriptional regulator, LysR family from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  112 bits (280), Expect = 1e-29
 Identities = 89/281 (31%), Positives = 127/281 (45%), Gaps = 6/281 (2%)

Query: 11  IRLRHLHTFVAVAQQGTLGRAAETLNLSQPALSKTLNELEQLTGARLFERGRQGAQLTLP 70
           +RL HL    A+   GTL  AA  L+ +QPA++K L ELE   G RLFERGR G   T  
Sbjct: 13  VRLSHLLLCRALVSTGTLHGAARLLHRTQPAVTKMLQELESSLGVRLFERGRMGTHPTAS 72

Query: 71  GEQFLTHAVRVLDAINTAGQSLHRKEGPNNDVVRVGALPTAALGILPSVIGQFHQQQKET 130
           G  FL  A  +L+        L   E     ++RVGA P   L +LP  +G+F +++   
Sbjct: 73  GRAFLHRAEVMLNEWGILRDELQAIEAGEAGLLRVGATPIMLLSLLPRALGRFLERRPGM 132

Query: 131 TLQVATMSNPMILAGLKTGEIDIGIGRMS----DPELMTGLNYELLFLESLKLVVRPNHP 186
            ++    S   +L  L +GE+D  +GR S    D E    L  E L+ E+L +V    HP
Sbjct: 133 LVRFREGSIHDLLIALDSGEVDCVVGRFSGELLDSEPRRTLRVERLYDETLAIVAGARHP 192

Query: 187 LL--QENVTLSRVLEWPVVVSPEGTAPRQHSDALVQSQGCKIPSGCIETLSASLSRQLTV 244
           L   + +V    + +   V+ P     RQ  +      G   P   +E+ S + S  L  
Sbjct: 193 LARRRRSVGWQELAQAQWVLPPPELVTRQLLNTEFIRGGVTPPKPLMESASFTSSLALAH 252

Query: 245 EYDYVWFVPSGAVKDDLRHATLVALPVPGHGAGEPIGILTR 285
           E   +  VP  A +   RH  +  L  P      PI I+ R
Sbjct: 253 ELVTLAMVPLDAARLAQRHGLVRVLRTPLSTFSAPISIVQR 293