Pairwise Alignments

Query, 155 a.a., outer membrane lipoprotein SlyB from Escherichia coli ECRC98

Subject, 154 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  103 bits (256), Expect = 2e-27
 Identities = 62/145 (42%), Positives = 87/145 (60%), Gaps = 8/145 (5%)

Query: 1   MIKRVLVVSM---VGLSLVGCVNNDTLSGDVYTASEAKQVQNVSYGTIVNVRPVQIQGGD 57
           M K VL+V+    + L L GC ++  L+GD Y+  EA++VQ V  GTI ++RPV+I+G  
Sbjct: 1   MRKSVLLVACFTTLSLLLGGCASS--LTGDSYSRDEARRVQTVRMGTIESLRPVKIEG-- 56

Query: 58  DSNVIGAIGGAVLGGFLGNTVGGGTGRSLATAAGAVAGGVAGQGVQSAMNKTQGVELEIR 117
               IG   GAV+GG  G+ +GGG G  +    GAVAGG+ G   +  + +TQGVE+ +R
Sbjct: 57  TKTPIGGAAGAVIGGVGGSAIGGGRGSIVTAVIGAVAGGLLGSATEEGLTRTQGVEITVR 116

Query: 118 KDDGNTIMVVQK-QGNTRFSPGQRV 141
           +DDG+    VQ  Q N  F  G RV
Sbjct: 117 EDDGSMRAYVQAVQENEIFRIGDRV 141