Pairwise Alignments

Query, 334 a.a., L,D-transpeptidase LdtE from Escherichia coli ECRC98

Subject, 320 a.a., L,D-transpeptidase linking Lpp to murein from Escherichia coli BL21

 Score =  297 bits (761), Expect = 2e-85
 Identities = 153/300 (51%), Positives = 201/300 (67%), Gaps = 3/300 (1%)

Query: 6   LLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDTAAMLI 65
           L   T   A +    A A  +PLPP GSRLVG+N+ + V+    +L+AIA++++   + +
Sbjct: 11  LTFFTFAAAVALALPAKANTWPLPPAGSRLVGENKFHVVENDGGSLEAIAKKYNVGFLAL 70

Query: 66  LEANNTIAP-VPKPGTTITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGI 124
           L+AN  + P VP+ G+ +TIP Q LLPDAPR+GI++N+AELRLYYYPPG+N V VYPIGI
Sbjct: 71  LQANLGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGKNSVTVYPIGI 130

Query: 125 GLQGLET--PVMETRVGQKIPNPTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYALR 182
           G  G +T  P M T V  K  NPTWTPTA IR R   +GI+LP VVPAGP+NP+G +A+R
Sbjct: 131 GQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGPDNPMGHHAIR 190

Query: 183 LAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYSVE 242
           LA   G YL+HGT+A   +G+RVSSGCIR+   DIK LFS V  GT V +IN P+K S E
Sbjct: 191 LAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNIINTPIKVSAE 250

Query: 243 PNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPVAV 302
           PNG R VEVH+PLS +   + Q +P TL +    FKD    D +++   +  R+G PV V
Sbjct: 251 PNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVMDVRSGMPVDV 310