Pairwise Alignments

Query, 504 a.a., arabinose ABC transporter ATP-binding protein AraG from Escherichia coli ECRC98

Subject, 501 a.a., ribose ABC transporter ATP-binding protein RbsA from Escherichia coli ECRC98

 Score =  402 bits (1033), Expect = e-116
 Identities = 212/495 (42%), Positives = 326/495 (65%), Gaps = 3/495 (0%)

Query: 8   LSFRGIGKTFPGVKALTDISFDCYAGQVHALMGENGAGKSTLLKILSGNYAPTTGSVVIN 67
           L  +GI K FPGVKAL+  + + Y G+V AL+GENGAGKST++K+L+G Y    G+++  
Sbjct: 5   LQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGTLLWL 64

Query: 68  GQEMSFSDTTAALNAGVAIIYQELHLVPEMTVAENIYLG-QLPHKGGIVNRSLLNYEAGL 126
           G+E +F+   ++  AG+ II+QEL+L+P++T+AENI+LG +  ++ G ++   +  EA  
Sbjct: 65  GKETTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYAEADK 124

Query: 127 QLKHLGMDIDPDTPLKYLSIGQWQMVEIAKALARNAKIIAFDEPTSSLSAREIDNLFRVI 186
            L  L +    D  +  LSIG  QMVEIAK L+  +K+I  DEPT +L+  E ++LFRVI
Sbjct: 125 LLAKLNLRFKSDKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVI 184

Query: 187 RELRKEGRVILYVSHRMEEIFALSDAITVFKDGRYVKTFTDMQQVDHDALVQAMVGRDIG 246
           REL+ +GR I+Y+SHRM+EIF   D +TVF+DG+++    ++  +  D+L++ MVGR + 
Sbjct: 185 RELKSQGRGIVYISHRMKEIFESCDDVTVFRDGQFIAE-REVASLTEDSLIEMMVGRKLE 243

Query: 247 DIYGWQPRSYGEERLRLDAVKAPGVRTPISLAVRSGEIVGLFGLVGAGRSELMKGMFGGT 306
           D Y    ++ G+ RL++D +  PGV   +S  +R GEI+G+ GL+GAGR+ELMK ++G  
Sbjct: 244 DQYPHLDKAPGDIRLKVDNLCGPGVND-VSFTLRKGEILGVSGLMGAGRTELMKVLYGAL 302

Query: 307 QITAGQVYIDQQPIDIRKPSHAIAAGMMLCPEDRKAEGIIPVHSVRDNINISARRKHVLG 366
             T+G V +D   +  R P   +A G++   EDRK +G++   SV++N++++A R     
Sbjct: 303 PRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRA 362

Query: 367 GCVINNGWEENNADHHIRSLNIKTPGAEQLIMNLSGGNQQKAILGRWLSEEMKVILLDEP 426
           G  + +  E+      IR  N+KTP  EQ I  LSGGNQQK  + R L    KV++LDEP
Sbjct: 363 GGSLKHADEQQAVSDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEP 422

Query: 427 TRGIDVGAKHEIYNVIYALAAQGVAVLFASSDLPEVLGVADRIVVMREGEIAGELLHEQA 486
           TRG+DVGAK EIY +I    A G++++  SS++PEVLG++DRI+VM EG ++GE   EQA
Sbjct: 423 TRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTREQA 482

Query: 487 DERQALSLAMPKVSQ 501
            +   ++ A+ K+++
Sbjct: 483 TQEVLMAAAVGKLNR 497