Pairwise Alignments

Query, 325 a.a., recombination-associated protein RdgC from Escherichia coli ECRC62

Subject, 306 a.a., recombinase RdgC from Pseudomonas simiae WCS417

 Score =  263 bits (672), Expect = 4e-75
 Identities = 135/300 (45%), Positives = 197/300 (65%), Gaps = 1/300 (0%)

Query: 24  LWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDA-LTHVA 82
           +WFKNL++YRL++++ + AE +E  +A+    PC SQ++   G+V P G   DA L HV+
Sbjct: 1   MWFKNLLIYRLTQDLPVDAEALEAAMATKLARPCASQELTTYGFVAPFGKGEDAPLVHVS 60

Query: 83  NGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAF 142
              ++I ARKEE+ILP  V++ AL+ K+ ++EAEQ RK+ K E+D +KDE++ + LPRAF
Sbjct: 61  GDFLLIAARKEERILPGSVVRDALKEKVEEIEAEQMRKVYKKERDQIKDEIIQAFLPRAF 120

Query: 143 SRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMENPIELTLTEWV 202
            R S T   I    GLI+V+ AS K+AED L+ LR+ +G+LPV PL+++      +T+WV
Sbjct: 121 IRRSSTFAAIAPKQGLILVNSASPKRAEDLLSTLREVIGTLPVRPLTVKTAPTAIMTDWV 180

Query: 203 RSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRI 262
            +   A  F +LDE EL+   EDGG++R K+QDLT EEI  H+  GKVVT+L+L WQ ++
Sbjct: 181 TTQKPADDFFVLDECELRDTHEDGGIVRCKRQDLTGEEIQLHLTTGKVVTQLSLAWQDKL 240

Query: 263 QFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGE 322
            F++ D  ++KRLKF D L+DQ E    ++   + DA F LM       I  L+E LGGE
Sbjct: 241 SFMLDDKMTVKRLKFEDLLQDQAEQDGGDEALGQLDASFTLMMLTFGDFIPALVEALGGE 300