Pairwise Alignments

Query, 468 a.a., chitoporin from Escherichia coli ECRC62

Subject, 417 a.a., putative Porin from Pseudomonas putida KT2440

 Score = 48.5 bits (114), Expect = 4e-10
 Identities = 59/258 (22%), Positives = 97/258 (37%), Gaps = 20/258 (7%)

Query: 27  MPEARAEGFIDDSTLT---GGIYYWQRERDRKDVTDGDKYKTNLSHSTWNAN--LDFQSG 81
           +P A A GFI+DS L      +Y+ +  RD + ++             W     LD+QSG
Sbjct: 18  LPVAGAAGFIEDSKLKLQLRNVYFNENFRDEQGMSARAAATAKSERVEWAQGFLLDYQSG 77

Query: 82  YAADMFGLDIAAF--TAIEMAENGDSSHPNEIAFSKSNKAYDEDWSGDKSGISLYKAAAK 139
           +     GL + A     + +      S    +      +A DE  S   +GI+     AK
Sbjct: 78  FTQGTLGLGVDAMGLLGVRLDSGRGRSGTGLLPVHDDGRAADEFAS---AGIT-----AK 129

Query: 140 FKYGPVWARAGYIQPTGQTLLAPHWSFMPGTYQGAEAGANFDYGDAGALSFSYMWTNEYK 199
            + G    + G + P    L+      +P TYQG +  +     D   L+ +    + +K
Sbjct: 130 ARLGSTVVKHGTLLPKTPVLVYNDARLLPQTYQGTQLTST----DIDNLTLTAGHLDRFK 185

Query: 200 APWHLEMDEFYQNDKTTKVDYLHSI-GAKYDFKNNFVLEAAFGQAEGYIDQYFAKASYKF 258
                +    Y +          S  GA Y       L    G+ E +  Q FA   +  
Sbjct: 186 QRDSSDSTGLYLDGYGGPASGDFSFAGADYAVSKQLRLSYFHGELEHFYRQDFAGLVHDL 245

Query: 259 DIAGSPLTTSYQFYGTRD 276
            + G  LTT  +++ +RD
Sbjct: 246 PLGGGVLTTDLRYFKSRD 263