Pairwise Alignments

Query, 308 a.a., 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF from Escherichia coli ECRC62

Subject, 338 a.a., 23S rRNA methyltransferase from Pseudomonas simiae WCS417

 Score =  313 bits (802), Expect = 4e-90
 Identities = 160/308 (51%), Positives = 209/308 (67%), Gaps = 12/308 (3%)

Query: 8   LHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAHFYAVA 67
           LHPRNRH  RYD   L +  PEL QF+ + P G++S+DFA+P AV+  N+ALL  FY + 
Sbjct: 31  LHPRNRHTGRYDFPALIKTTPELAQFVIINPYGKESIDFASPDAVRVFNRALLKAFYGIQ 90

Query: 68  NWDIPDGFLCPPVPGRADYIHHLADLLAEAS-GTIPANA--SILDIGVGANCIYPLIGVH 124
           +WDIP  +LCPPVPGRADY+H LADLLA  + G IP  +   +LDIG+GANC+YPLIG  
Sbjct: 91  HWDIPADYLCPPVPGRADYVHFLADLLASTNDGKIPRGSIVKVLDIGMGANCVYPLIGYM 150

Query: 125 EYGWRFTGSETSSQALSSAQAIISSNPGLNRAIRLRRQKESGAIFNGIIHKNEQYDATLC 184
           EY W F GSE    A+++A+AI+ SN  L++ I+LR+Q     I  G++   E++D T+C
Sbjct: 151 EYRWNFLGSEVDPIAVAAARAIVQSN-DLSKVIQLRQQTNPKQILLGLLEPGERFDLTMC 209

Query: 185 NPPFHDSAAAARAGSERKRRNLG----LNKDDALNFGGQQQELWCEGGEVTFIKKMIEES 240
           NPPFH S   A  GSERK R LG      K   LNFGGQ  ELWCEGGE  F+ ++I ES
Sbjct: 210 NPPFHASMDEATKGSERKWRALGKADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAES 269

Query: 241 KGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM--NDE 298
             FA +V+WF++LVS+  NLP +  AL   G ++    EM+QGQKQSRF+AWTF   N++
Sbjct: 270 AHFAHKVLWFSTLVSKASNLPAIETALKKAGVLESQVVEMSQGQKQSRFVAWTFQTKNEQ 329

Query: 299 Q--RRRFV 304
           Q  R+R+V
Sbjct: 330 QIWRQRWV 337