Pairwise Alignments

Query, 684 a.a., DNA helicase IV from Escherichia coli ECRC62

Subject, 796 a.a., 3'-5' exonuclease from Paraburkholderia sabiae LMG 24235

 Score =  114 bits (285), Expect = 2e-29
 Identities = 102/340 (30%), Positives = 149/340 (43%), Gaps = 47/340 (13%)

Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256
           LNP Q  AV       L+LAGAGSGKT VL+ R  WL+ +G ASP  +L + F  KAA E
Sbjct: 8   LNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGFASPPTVLGVTFTNKAARE 67

Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314
           M  R+   L   T  +   TFH L   +++   +          D        I +   Q
Sbjct: 68  MMSRLSALLPIDTRGMWIGTFHGLCNRMLRAHYR----------DAGLPQTFQILDTSDQ 117

Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374
            S  K   KG                   DDEK     A  L  +++  +  G    ++ 
Sbjct: 118 LSAIKRLMKGLNI----------------DDEKYP---AKNLQYFINNAKEQGLRPKDVD 158

Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFIS 429
           AS      D F+++      L +A+    + E  VDF  L+ +   +L      +  + +
Sbjct: 159 AS------DNFNRKF---VELYEAYDQQCQREGVVDFPELLLRCYELLSYNPPLRAHYQA 209

Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489
            ++HILVDEFQD +  + A L  L  +++   +FAVGDD Q+IY F GA +     F   
Sbjct: 210 RFRHILVDEFQDTNKLQYAWLKMLAGEHN--AIFAVGDDDQSIYAFRGANVGNMRDFESE 267

Query: 490 FGEGDRCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529
           F   +   L+  YR +  I + AN  I  N  +L K L +
Sbjct: 268 FKVRNLIKLEQNYRSHGHILDAANHLIANNSRRLGKNLRT 307



 Score = 49.3 bits (116), Expect = 7e-10
 Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 41/226 (18%)

Query: 447 AALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEG-DRCD-----LDT 500
           A L+A +R + +Q +L    +  + + R SG      + F++N  EG +R +     ++ 
Sbjct: 453 ANLIAKMRAETAQMSL---PETVEYVVRASGL-----SEFYQNEREGQERLENLQELVNA 504

Query: 501 TYRFNSRIG---EVANRFIQQNPGQLKKPLNSLTNGDEKAVTLLDESQLDALLDKLSGYA 557
              F S  G   +   R I   PG    P   + + D+  V +LD +         +  A
Sbjct: 505 ATAFVSEEGYGLDTPARSIPLRPGATSAP-ELVVSTDDPGVDVLDAANP-------ADPA 556

Query: 558 KPEERILILARYHHMRPASLEKAATRWPKLQ--IDFMTIHASKGQQADYVIIVGLQEGSD 615
           +  + +  LA +  +  ASLE    +    Q  +  MT+HA+KG +   V I GL+EG  
Sbjct: 557 QNPDTMTPLAGF--LSHASLEAGDNQAQAGQEAVQLMTVHAAKGLEFTAVFITGLEEGLF 614

Query: 616 GFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALF 661
               +A ES   E            EERRLMYVA+TRA+ R++  F
Sbjct: 615 PHENSAMESDGLE------------EERRLMYVAITRAKERLYLSF 648