Pairwise Alignments

Query, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

Subject, 301 a.a., Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  248 bits (633), Expect = 1e-70
 Identities = 126/265 (47%), Positives = 174/265 (65%), Gaps = 6/265 (2%)

Query: 34  VTGAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPP------SAAHWFGTDEVGRDLFS 87
           V G V I+L++L+ +F+PW+A H PN  +    L PP      S ++  GTD +GRD+ S
Sbjct: 34  VIGLVTIILLMLVAMFAPWIAPHAPNETNSAVFLQPPAWQQGGSTSYLLGTDAIGRDILS 93

Query: 88  RVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMA 147
           R++ G++ S+  G+ VVA++ ++G +LG ++G   G  +  IMR+MDI+L++PSL+L + 
Sbjct: 94  RLMYGARLSLSIGVAVVALSVVVGVVLGLIAGFFRGVLEIAIMRLMDIVLTLPSLLLAIV 153

Query: 148 LAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHIL 207
           + A LGP L NAMLA+AIV +P YVR+ R   +      YV AA+  GA    L+   +L
Sbjct: 154 IVAILGPGLVNAMLAVAIVVLPHYVRITRAAVIAEVSRDYVTAARVSGAGTLRLMFREVL 213

Query: 208 RNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFP 267
            N   PLIVQASL I +AIL AA LGF+GLGAQ PS EWG M+A+ R +VL  WW   FP
Sbjct: 214 PNCAAPLIVQASLGISTAILDAAALGFLGLGAQPPSPEWGTMLADAREFVLRAWWVVTFP 273

Query: 268 GAAILLTAVGFNLFGDGIRDLLDPK 292
           G AIL+  + FNL GDG+RD LDPK
Sbjct: 274 GLAILMAVLAFNLLGDGLRDALDPK 298