Pairwise Alignments

Query, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

Subject, 310 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  257 bits (657), Expect = 2e-73
 Identities = 135/283 (47%), Positives = 187/283 (66%), Gaps = 3/283 (1%)

Query: 13  QKQTRFNGAKLVWM-LKGSPLTVTGAVIIVLMLLMMIFSPWLATHDPNAIDL-TARLLPP 70
           +KQ R   A ++W     + L + G VII+ +L + +F+  LA H+P   DL  ARLLPP
Sbjct: 24  RKQARLGRAYVIWRRFSENRLALLGLVIIIALLFVALFADVLAPHNPVQGDLRNARLLPP 83

Query: 71  -SAAHWFGTDEVGRDLFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAII 129
            +A +  GTD+ GRD+ SR++ GS+ ++   L+V  IA  IG ++G +SG  GG  DAI+
Sbjct: 84  GTAGYLLGTDDQGRDILSRLIHGSRLTLFVVLLVAIIAAPIGLIVGTVSGYAGGWVDAIL 143

Query: 130 MRIMDIMLSIPSLVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQ 189
           MRI DI L+ P LVL +AL AALGP + NA+LAIA+   P Y R+AR + +  R   ++ 
Sbjct: 144 MRITDIFLAFPKLVLALALVAALGPGIENAVLAIAVTSWPPYARIARAETMTFRNSDFIA 203

Query: 190 AAKTFGASRWHLINWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAM 249
           A K  GAS + ++  H++   L  LIV+ +LD+   IL AA LGF+GLGAQ P  EWGAM
Sbjct: 204 AVKLMGASPFRIVLKHVMPLCLSSLIVRVTLDMAGIILTAAGLGFLGLGAQPPLPEWGAM 263

Query: 250 VANGRNYVLDQWWYCAFPGAAILLTAVGFNLFGDGIRDLLDPK 292
           +A+GR ++LDQWW  A PG AIL+ ++GFNL GDG+RD LDPK
Sbjct: 264 IASGRRFILDQWWVAAMPGIAILIVSLGFNLLGDGLRDALDPK 306