Pairwise Alignments

Query, 411 a.a., NAD-dependent dihydropyrimidine dehydrogenase subunit PreA from Escherichia coli ECRC62

Subject, 427 a.a., NAD-dependent dihydropyrimidine dehydrogenase subunit PreA from Azospirillum sp. SherDot2

 Score =  328 bits (840), Expect = 2e-94
 Identities = 177/399 (44%), Positives = 247/399 (61%), Gaps = 9/399 (2%)

Query: 5   DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFF--IANEVSPRFD 62
           DL  T  G++ PNPF L+S+P  +      +A+  GWGGVV+KT+G    + N VS R+ 
Sbjct: 3   DLRSTIAGIRSPNPFWLASAPPTDKAYNVVRAFKAGWGGVVWKTLGEDPPVVN-VSSRYG 61

Query: 63  HLVKEDTGFIGFKNMEQIAEHPLEENLAALRQLKEDYPDKVLIASIMGENEQQ-WEELAR 121
             +  D   IGF N+E I++ PLE NL  + ++K D+PD+ ++ S+M   E++ W  LAR
Sbjct: 62  AHLDTDRRMIGFNNIELISDRPLEVNLQEIIEVKRDWPDRAMVVSLMARIEEEAWANLAR 121

Query: 122 LVQEAGA-DMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNI 179
            + E GA D +E N  CP  M    MGS +GQ PE+VE+  R VK    LP++ K+TPNI
Sbjct: 122 RIAETGAADGLELNLGCPHGMCERGMGSAIGQVPEMVEQVTRWVKNAVNLPVIVKLTPNI 181

Query: 180 GDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIAL 239
            ++   A AA+RGGAD ++ INTV SI  +DL+     P+V+GK S  GY G AVKPIAL
Sbjct: 182 TNILWSAEAARRGGADAVSLINTVNSIVAVDLDAMAPTPVVDGKGSHGGYCGPAVKPIAL 241

Query: 240 RFIQQMRTHPELCDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASG 299
             + ++  +P+    P+SGIGGI TW DAAEFL LGA  +QV T  M YG++IVEDM  G
Sbjct: 242 NMVAEIARNPDTRHLPVSGIGGITTWRDAAEFLALGATNVQVCTAAMTYGFKIVEDMIGG 301

Query: 300 LSHYLADQGFDSLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGH 359
           LS+++ ++G+ +L E+ G A  N+V   DL+ ++     I+   C+ CGRC+I C D  H
Sbjct: 302 LSNWMDEKGYRTLDELSGRAVRNVVNWNDLNMNFSTKAVIDPALCIDCGRCHIVCEDTSH 361

Query: 360 QA--MEWSEKTRTPHCNTEKCVGCLLCGHVCPV-GCIEL 395
           QA  ++  E  R      E+CVGC LC HVCPV  CI +
Sbjct: 362 QAIRIDQGEGRRVFTVVNEECVGCNLCSHVCPVPDCITM 400