Pairwise Alignments

Query, 365 a.a., branched chain amino acid ABC transporter substrate-binding protein LivJ from Escherichia coli ECRC62

Subject, 368 a.a., ABC transporter, substrate binding protein (branched chain amino acid) from Agrobacterium fabrum C58

 Score =  270 bits (690), Expect = 5e-77
 Identities = 145/360 (40%), Positives = 217/360 (60%), Gaps = 6/360 (1%)

Query: 1   MKGKALLAGCIALAFSNMALAE-DIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGG 59
           MK K L +  +A +F+   LA  +I + ++  ++GPVA YGDQ   GA+ AV++IN KGG
Sbjct: 1   MKLKTLTSVTLAASFAFAPLAHAEIVIGLIAPLTGPVAAYGDQVKNGAQTAVSEINKKGG 60

Query: 60  IKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMIT 119
           I G ++ +   DD  +PKQ V+ AN++V +GI +V+G + S    PASD++ + G+LM+T
Sbjct: 61  ILGEQVVLKLADDGGEPKQGVSAANQLVAEGIHFVVGPVTSGVAIPASDVFAENGVLMVT 120

Query: 120 PAATAPELTARGYQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDKQQYGEGLARAV 179
           P ATAP LT RG   + RT G D  Q   AAKY+L  +K ++IAI+HDK  YG+GLA + 
Sbjct: 121 PTATAPGLTNRGLSNVFRTCGRDDQQAEVAAKYVLANLKGKKIAIIHDKGAYGKGLADSF 180

Query: 180 QDGLKKGNANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGL 239
           +  L  G    V +D +T GEKD   L ARLK +N D VY+GGYHPE G ++RQ +  G 
Sbjct: 181 KATLNAGGVTEVLYDALTPGEKDLGALTARLKSDNADIVYFGGYHPEAGLLVRQLKDIGS 240

Query: 240 KTQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVW 299
           K   +G +G++N    NI  ++ EG + T   +  +   +K   +A+KA    P+ AF  
Sbjct: 241 KAAVIGGDGLSNSEFWNIGAKAGEGTIFTNASDALKNDDSKAAAEALKA-ANIPAEAFTL 299

Query: 300 TTYAALQSLQAGLNQ---SDDPAEIAKYLKA-NSVDTVMGPLTWDEKGDLKGFEFGVFDW 355
             YAA++ L+AG+ +   + D   +AK LK+  +  T +G +T+ + GDL    F +F W
Sbjct: 300 NAYAAVEVLKAGIEKAGSAKDSEAVAKVLKSGEAFPTAIGKVTYGDNGDLTSQAFSLFKW 359