Pairwise Alignments

Query, 506 a.a., aerotaxis sensor receptor Aer from Escherichia coli ECRC62

Subject, 521 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  247 bits (630), Expect = 8e-70
 Identities = 170/528 (32%), Positives = 264/528 (50%), Gaps = 50/528 (9%)

Query: 1   MSSHPYVTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGFTLQELQGQPHNMVRHPD 60
           M ++  VTQ+         L+STTD +  IT+ ND FV++SGF+  EL   PHN+VRHPD
Sbjct: 1   MRNNQPVTQRERTFPAQQRLISTTDAKGVITYCNDAFVEISGFSRDELVRAPHNLVRHPD 60

Query: 61  MPKAAFADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPMVREGKISGYMSIRTRATD 120
           +P A FA MW TLK+G PW GIVKNR K GDHYWV A   P+    ++ GY S+R + T 
Sbjct: 61  VPPAVFAHMWSTLKQGLPWMGIVKNRCKTGDHYWVNAYVTPVFEGNQVVGYESVRIKPTA 120

Query: 121 EEIAAVEPLYKALNAGRTSKRIHKGLVVRKGWLGKLPSLPLRWRARGVMTLMFILLAAML 180
           E+I   E LY  +N G+++      +  R  WL  L      W       L FIL++ + 
Sbjct: 121 EQIRRAEALYHRINQGKSA------IPQRDKWLPVLQD----W-------LPFILVSQLS 163

Query: 181 WFVAAPVVTYF----LCVLVVLLASACFEWQIVRPIENVARQALKVATGERNSVEHL-NR 235
           + + A + +++       L V L      WQ  R ++ + R A +  +    +  +  +R
Sbjct: 164 FMIGASLNSHWGFALAAGLSVPLGLLGLSWQ-QRGLKRLLRLAEQTTSDPLIAQMYTDSR 222

Query: 236 SDELGLTLRAVGQLGLM--CRWLINDVSSQVSSVRNGSETLA----KGTDELNEHTQQTV 289
             +  L +  + Q   +  C   + D +  ++     S TLA     G +     T+Q  
Sbjct: 223 GAQARLEMSILSQEARLKTCLTRLQDTAEHLNDQAAQSNTLAHNSSSGLERQRVETEQVA 282

Query: 290 DNVQQTVATMNQMAASVKQNSATASAADKLSITASNAAVQGGEAMTTVI-------KTMD 342
             V Q  AT  ++A+ V++ +     A++L+    + A +  EA+  +         T+ 
Sbjct: 283 TAVNQMAATTQEVASHVQRTADATQEANRLTGRGRDIAGETREAIQRLSVAVGETGVTVT 342

Query: 343 DIADSTQRIGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSAN 402
            +A  +  IG +  +I  IA QTN+LALNAA+EAARAGE G+GFAVVA EVR LA R+A 
Sbjct: 343 QLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAE 402

Query: 403 AANDIRKLI--------------DASADKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQ 448
           +   I  LI              DA   + + G  +V  A + +  I   V ++T +  Q
Sbjct: 403 STGQIHALIAKLQQTAAAAVQTMDAGHRQAEEGVARVMEADQALVGISEAVAHITDMTTQ 462

Query: 449 ISHSTLEQADGLSSLTRAVDELNLITQKNAELVEESAQVSAMVKHRAS 496
           I+ +T EQ+     ++R +  + L+  + +E    SAQ+S  + H A+
Sbjct: 463 IAAATEEQSSVAEEISRNISTIALLADQTSEQAMNSAQLSEELTHTAN 510