Pairwise Alignments

Query, 356 a.a., LPS export ABC transporter permease LptF from Escherichia coli ECRC62

Subject, 373 a.a., FIG000988: Predicted permease from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 86.7 bits (213), Expect = 9e-22
 Identities = 75/298 (25%), Positives = 142/298 (47%), Gaps = 10/298 (3%)

Query: 34  RYLTEAANGTLALDVVLDIVFYKVLIALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAG 93
           R L  A+ G++    +  ++ Y V+  +  +L + L++++  TL +MY DSE+    ++G
Sbjct: 33  RTLGLASRGSVDPQEIALVLGYTVIGRMPTILTLALFIAIVFTLSRMYRDSEMIIWFSSG 92

Query: 94  GSPGRLYKAVLYLAIPLSIFVTLLSMYGRPWAYTQIYQLEQQSQSELDVRQLRAKKFNTN 153
            S G   + V+  + P+ + +T++  +  PWA  Q  QL  + +   D+ ++   +F  +
Sbjct: 93  RSLGGFLRPVMRFSWPILVVITVMVFFVWPWANAQTDQLRDRFERRGDLERVAPGQFQES 152

Query: 154 DNGRMILSQTVDQDNNRLTDA--LIYTSTAN--RTRIFRARSVDVVDPSPEKPTVMLHNG 209
            +GR +    +D+D    T+   +  +ST N  R  +  ARS   ++   E+  +ML+NG
Sbjct: 153 SSGRRVF--FIDKDTADGTEGRNIFISSTENDGRETVTSARS-GRIEWLNEQQFLMLNNG 209

Query: 210 TAY--LLDHQGRDDNEQIYRNLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAELQWR 267
                  D      +E      Q+ ++ + Q      KA++  +L R    A+  EL WR
Sbjct: 210 QRLETPADQSNLKVSEFEEYGTQIGVSAISQRGEA-LKARTSWDLIRDPTRANLGELGWR 268

Query: 268 QSRGLTALLMALLAISLSRVKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPL 325
               LTAL   L+A++ +   PR GR   L      F+  +   ++ ++ VA+G   L
Sbjct: 269 IGMALTALNFVLIAVATTTGNPRAGRGGNLFFTLFAFVFYYNLLNLGQSWVASGLFSL 326