Pairwise Alignments

Query, 457 a.a., multidrug transporter from Escherichia coli ECRC102

Subject, 484 a.a., Probable efflux pump outer membrane protein TtgC from Pseudomonas putida KT2440

 Score =  343 bits (881), Expect = 5e-99
 Identities = 200/462 (43%), Positives = 282/462 (61%), Gaps = 17/462 (3%)

Query: 5   SLIFLVLLSAGCVSLDPHYSTPESPI-------PATLPGAQGQGKAISHDWQQVIHDPRL 57
           SL     +  GC SL P Y TPE+P+       PA  P       A    W+Q  HDP L
Sbjct: 7   SLAVTAFILGGC-SLIPDYQTPEAPVAAQWPQGPAYSPTQSADVAAAEQGWRQFFHDPAL 65

Query: 58  QQVVTIALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLANGTET--- 114
           QQ++  +L +NRD++ A  ++D+ RA Y    A LFP V+A  S +R R  AN ++T   
Sbjct: 66  QQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANMSQTGES 125

Query: 115 --TAEADGT--VSSFTLDLFGRNQSLSRAARETWLASEFTAQNTRLTLIAEISTAWLTLA 170
             T++   T  VS++ LDLFGR +SL+  A ET+L+SE   ++T++ L+A ++ A+ T  
Sbjct: 126 GITSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVANAYYTWQ 185

Query: 171 ADNSNLALAKETMTSAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQ 230
           AD +   L +ET+ + E S  + +R  +VG A+A DVS+A +  + AR   + YQ  V Q
Sbjct: 186 ADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRLVAQ 245

Query: 231 DKNALNLLAGTTLEENLLPGTLESLPEQMISLVPAGVSSDVLLRRPDIQEAEHNLKSANA 290
           D N+L +L GT +  +L       L    ++ VPAG+ SD+L RRPDIQEAEH LK+ANA
Sbjct: 246 DVNSLTVLLGTGIPADLAKPL--ELDADQLAEVPAGLPSDILQRRPDIQEAEHLLKAANA 303

Query: 291 DIGAARANFFPTISLTASAGVGSDALSSLFSHGMQIWSFTPSVTLPLFTGGSNLAQLRYA 350
           +IGAARA FFP+ISLTA+AG  S  +  LFS G   W F P + LP+F  GS  A L Y+
Sbjct: 304 NIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNAGSLKASLDYS 363

Query: 351 EAQKRGLIATYEKTVQRAFKDVANALARRTTLEEQLDAQRQYVKAEQQTVDVGLRRYQTG 410
           + QK   +A YEKT+Q AF++V++ LA R T EEQL AQR  V+A Q    +  RRY+ G
Sbjct: 364 KIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRLAERRYRIG 423

Query: 411 VGDYLTVLTAQRSLWSAQQELLALQLTDFTNRITLWQSLGGG 452
           +   LT L AQR+L+SAQQ L+  +L+  T+ + L+++LGGG
Sbjct: 424 IDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGG 465