Pairwise Alignments

Query, 328 a.a., ABC transporter ATP-binding protein from Escherichia coli ECRC102

Subject, 335 a.a., Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  278 bits (711), Expect = 1e-79
 Identities = 143/322 (44%), Positives = 205/322 (63%), Gaps = 3/322 (0%)

Query: 5   VLDIQQLHLSFPGFNGDVHALNNVSLQINRGEIVGLVGESGSGKSVTAMLIMRLLPTGSY 64
           +L++  L ++F   +GDV A+N+++  +  GE +G+VGESGSGKS TA  +M LL T   
Sbjct: 17  LLEVNDLRVTFATPDGDVTAVNDLNFTLRAGETLGIVGESGSGKSQTAFALMGLLATNGR 76

Query: 65  CVHRGQISLLGDDVLNAREKQLRQWRGARVAMIFQEPMTALNPTRRIGLQMMDVIRHHQP 124
               G  +  G ++LN  E++L   R  +++MIFQ+PMT+LNP  R+G Q+M+V+  H+ 
Sbjct: 77  I--GGSATFNGREILNLPERELNTLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKG 134

Query: 125 ISRREARAKAIALLEEMQIPDTVEVMSRYPFELSGGMRQRVMIALAFSCEPQLIIADEPT 184
           +S+ EA  +++ +L+ +++P+  + M  YP E SGGMRQRVMIA+A  C P+L+IADEPT
Sbjct: 135 MSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPT 194

Query: 185 TALDVTVQLQVLRLLKHKARDSGTAVLFISHDMAVVSQLCDSVYVMYAGSVIESGVTADV 244
           TALDVTVQ Q++ LL    R+  TA++ I+HD+ VV+ +CD V VMYAG  +E G   DV
Sbjct: 195 TALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGKARDV 254

Query: 245 IHHPRHPYTIGLLQCAPEHGVPRQPLPAIPGTVPNLTHLPDGCAFRDRCYAAGAQCENVP 304
            + P HPY+IGLL   P        +  IPG  PNL  LP GC F+ RC  A   C N P
Sbjct: 255 FYQPVHPYSIGLLNAVPRLDSEGAEMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICNNAP 314

Query: 305 ALTACGDNNQRCACWYPQQEVI 326
            L A      R AC+ P +E++
Sbjct: 315 PLEAFSPGRLR-ACFKPVEELL 335