Pairwise Alignments

Query, 328 a.a., ABC transporter ATP-binding protein from Escherichia coli ECRC102

Subject, 324 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  275 bits (702), Expect = 1e-78
 Identities = 143/320 (44%), Positives = 201/320 (62%), Gaps = 4/320 (1%)

Query: 1   MTQPVLDIQQLHLSFPGFNGDVHALNNVSLQINRGEIVGLVGESGSGKSVTAMLIMRLLP 60
           M Q V+D++ L + FPG  G V AL+++SL I  GEI+G+VGESG+GKS+T + I  LL 
Sbjct: 1   MNQSVIDVRNLKVEFPGRRGTVTALSDISLSIRPGEILGVVGESGAGKSMTGLAIQGLLE 60

Query: 61  TGSYCVHRGQISLLGDDVLNAREKQLRQWRGARVAMIFQEPMTALNPTRRIGLQMMDVIR 120
                +  G+I L    +    ++ +   RG  +  IFQ+P+T+LNP   +G Q+++ IR
Sbjct: 61  KPGR-IADGEIWLGSRRIDQLDDRAMESIRGREIGAIFQDPLTSLNPLFTVGAQLVETIR 119

Query: 121 HHQPISRREARAKAIALLEEMQIPDTVEVMSRYPFELSGGMRQRVMIALAFSCEPQLIIA 180
            H P+S+ +ARA+AI LL ++ IP   + +  YP + SGGMRQRV+IALA S  P+LIIA
Sbjct: 120 QHLPLSKADARARAIQLLRDVGIPSPADRIDHYPHQFSGGMRQRVVIALALSASPKLIIA 179

Query: 181 DEPTTALDVTVQLQVLRLLKHKARDSGTAVLFISHDMAVVSQLCDSVYVMYAGSVIESGV 240
           DEPTTALDV++Q Q++ LL+   ++  TAV+ ++HDM V+++  D V V+YAG +IE G 
Sbjct: 180 DEPTTALDVSIQAQIISLLRRLCKEKQTAVMLVTHDMGVIAEAADRVAVLYAGRLIEVGP 239

Query: 241 TADVIHHPRHPYTIGLLQCAPEHGVPRQPLPAIPGTVPNLTHLPDGCAFRDRCYAAGAQC 300
              V+H PRHPYT GL+   P  G   + L  I G +P L  +P GCAF  RC  AG +C
Sbjct: 240 VEQVLHEPRHPYTQGLMASIPSLGARVERLNQIDGAMPRLDAIPPGCAFNPRCSFAGPRC 299

Query: 301 -ENVPALTACGDNNQRCACW 319
               P L   G  N   ACW
Sbjct: 300 LRQRPELETVG--NGASACW 317