Pairwise Alignments

Query, 431 a.a., DNA processing protein DprA from Escherichia coli ECRC102

Subject, 374 a.a., Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 67.8 bits (164), Expect = 5e-16
 Identities = 81/305 (26%), Positives = 131/305 (42%), Gaps = 32/305 (10%)

Query: 135 YPVRLKNRLRTDAPPVLFGCGNKALLQAEGMAIVGSRDAPTDDLRYTQQLAAKLAQQGIC 194
           YP +L  R   D P  +F  G+ A L    +A+VGSR       R+ + L   LA+ G+ 
Sbjct: 82  YPPQL--RAIDDYPGAIFIDGDPACLHTCQLAVVGSRSHSWYGERWGRLLCESLAKSGLT 139

Query: 195 VISGGARGIDECAMASALEAGGTAVGVLADSLLKTSTLVKWREGLIAGNLV-----LISP 249
           + SG ARGID  A  +A+  GG +V VL + L K   +   R  ++A NL+     ++S 
Sbjct: 140 ITSGLARGIDGVAHNAAVSMGGKSVAVLGNGLAK---IYPRRHAMLAENLIATGGAVVSE 196

Query: 250 FYPEVRFTVGNAMARNKYIYCLAESAMVVRAGMTGGTITGAMEALKHQWLPVQVKPNQDM 309
           F         +   RN+ I  L++  +V+ A +  G++  A  AL+ Q   V   P   +
Sbjct: 197 FPLSTPPLPQHFPRRNRIISGLSKGVLVIEAALRSGSLVTARCALE-QGRDVFALPG-PI 254

Query: 310 QSANSRLVENGASWSAEQAENVTIRLPDV-PGLMYDR--ALRNAQPELFSLHEDDANYAV 366
            S  S     G  W  +Q   +     D+   L Y        A+  L+SL++D+   A 
Sbjct: 255 GSPGS----EGTHWLIKQGATLVTTPEDILENLQYGLHWLPTTAENSLYSLNQDE---AA 307

Query: 367 MPAYTPVDFYQLFVAELAILAKESISIERLASCTGLTIEQISVWLNRAEEEGRVIRLGEG 426
           +P          F   LA +  E   ++ +A   G  +  +   L   E  G +  +  G
Sbjct: 308 LP----------FPELLANVGDEVTPVDVVAERAGQPVPAVVAQLLELELAGWIAAVPGG 357

Query: 427 HYQFR 431
           + + R
Sbjct: 358 YVRLR 362