Pairwise Alignments

Query, 308 a.a., HTH-type transcriptional activator AllS from Escherichia coli ECRC101

Subject, 302 a.a., LysR family transcriptional regulator from Serratia liquefaciens MT49

 Score =  113 bits (283), Expect = 5e-30
 Identities = 72/277 (25%), Positives = 136/277 (49%), Gaps = 1/277 (0%)

Query: 5   ETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENTGVALFFRTTRSVTLTAAGEH 64
           E L    A+   GSF+ AA  L KT + +SY ++ LE +  + L  R+      T  G+ 
Sbjct: 6   EALLILDALDRHGSFAAAAAVLFKTPSALSYMVQKLESDLDITLLDRSGHRAKFTDTGKL 65

Query: 65  LLSQARDWLSWLESMPSELQQVNDGVERQVNIVINNLLYNPQAVAQLLAWLNERYPFTQF 124
           +L + R  L   + +  + + V +G E ++ + I+   +  + +  L+    ++   T+ 
Sbjct: 66  MLEKGRVLLRAAQDLEQQARYVENGWESEITLGID-ASFPFERLLPLMEEFYQQNHHTRL 124

Query: 125 HISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFSLDPLGSVQWRFVMAADHPLANVEE 184
            +S ++  G W+SL+Y    + IG          ++   LG + + F +A  HPLA + E
Sbjct: 125 RVSHEVLAGSWESLVYGCADIIIGAICEPPSRVGYAFSQLGRLDYVFAVAPQHPLATMAE 184

Query: 185 PLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQKEIIVPDMETKIAAHLAGVGIGFLPKS 244
           PL +A++R+  AV + D++R    +    L  Q  + V   + K+ A L G+G G+LP+ 
Sbjct: 185 PLPKAEIRQHRAVVVRDTSRVNAPQNLNILEEQDTLTVFGFDAKLRAQLNGLGCGYLPRY 244

Query: 245 LCQSMIDNQQLVSRVIPTMRPPSPLSLAWRKFGSGKA 281
           L +  + + +LV++ + + R        WR+  +G A
Sbjct: 245 LAEPYLKSGELVAKNVESERCSDVAYFGWRENNAGLA 281