Pairwise Alignments

Query, 786 a.a., DEAD/DEAH box helicase from Escherichia coli ECRC101

Subject, 691 a.a., DNA repair helicase from Pseudomonas sp. S08-1

 Score = 50.1 bits (118), Expect = 4e-10
 Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 32/174 (18%)

Query: 422 GNLRAEQEEAVSALLRYD-TGVLCAPTAFGKTVTAAAVIAK---------RKVNTLILVH 471
           G +R  QE+A+ A    +  G+ C  T  GKT+TA     +          K+  +I V 
Sbjct: 247 GKIRGYQEKAIKAWFAQNGQGLFCMATGAGKTITALTAATRLLDHFRTQQAKLVIVITVP 306

Query: 472 RTELLKQWQERLAVFLQAGDSIGIIGGGKHKPCGNIDIAVVQSIS--------------- 516
              L +QW +  A F    D+I   GG K K  G +  A  Q +S               
Sbjct: 307 YVHLGEQWADEAAFF--GYDAIKCYGG-KDKWLGALQSAYNQMLSGDRDHMLAIAVNDTF 363

Query: 517 RQGEVEPL---VRNYGQIIVDECHHIGAVSFSAILKETNARYLLGLTATPIRRD 567
           +  + +     VR    ++ DE H++GA + +  L +  AR+ +GL+ATPIR +
Sbjct: 364 KNSQFQSFLDSVRTNLLLVSDEVHNMGAENIAQKLPQ-QARFRIGLSATPIRHN 416



 Score = 26.9 bits (58), Expect = 0.004
 Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 6/92 (6%)

Query: 676 SKKKRAMLISGLNALPPDSPRILLSTGRLIGEGFDHPPLDTLILAMPVSWKGTLQQYAGR 735
           SK++RA ++    A   D+    +   + + EG D P   T  +    +      Q  GR
Sbjct: 561 SKEQRAEILRRFKAGDIDA----IVAIKCLDEGVDIPQTKTAYIVASSTNPRQFIQRRGR 616

Query: 736 LHREHTGKSDVRIIDFVDTAYPVLLRMWDKRQ 767
           + R++ GK    I DF+  A P L ++ + ++
Sbjct: 617 VLRQYDGKGLAAIYDFI--AIPPLEKLGEDQE 646