Pairwise Alignments

Query, 91 a.a., DNA-directed RNA polymerase subunit omega from Escherichia coli ECRC101

Subject, 129 a.a., DNA-directed RNA polymerase omega subunit from Agrobacterium fabrum C58

 Score = 61.2 bits (147), Expect = 3e-15
 Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 4/90 (4%)

Query: 1  MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLIN 60
          MARVTV+D ++K+ NRF+LVL+A+ RARQ+   G    V  +NDK  V+ALREI +  ++
Sbjct: 1  MARVTVEDCIDKVDNRFELVLLASHRARQIS-QGSSITVDRDNDKNPVVALREIADETLS 59

Query: 61 NQILD---VRERQEQQEQEAAELQAVTAIA 87
             L    +   Q+  E +  E   VT  A
Sbjct: 60 PDDLKEDLIHSLQKHVEVDEPEPDPVTLAA 89