Pairwise Alignments

Query, 137 a.a., DNA-binding transcriptional regulator H-NS from Escherichia coli ECRC100

Subject, 134 a.a., DNA binding protein, nucleoid-associated (NCBI) from Escherichia coli BW25113

 Score =  146 bits (368), Expect = 1e-40
 Identities = 78/135 (57%), Positives = 93/135 (68%), Gaps = 1/135 (0%)

Query: 1   MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ 60
           MS  L+ LNNIRTLRA ARE +++ LEEMLEK  VV  ERREEE     E+ ER  K+  
Sbjct: 1   MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEEQQQRELAERQEKIST 60

Query: 61  YREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIK 120
           + E++ ADGI+P ELL + +A       KR  RPAKY + D NGETKTWTGQGRTP  I 
Sbjct: 61  WLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDVNGETKTWTGQGRTPKPIA 120

Query: 121 KAMDEQGKSLDDFLI 135
           +A+ E GKSLDDFLI
Sbjct: 121 QALAE-GKSLDDFLI 134