Pairwise Alignments

Query, 334 a.a., flagellar motor switch protein FliM from Escherichia coli ECRC100

Subject, 357 a.a., Flagellar motor switch protein FliM from Azospirillum sp. SherDot2

 Score =  106 bits (265), Expect = 8e-28
 Identities = 77/318 (24%), Positives = 148/318 (46%), Gaps = 13/318 (4%)

Query: 5   ILSQAEIDALLNGDSEVKDEPTASVSGESDIRPYDPNTQRRVVR-ERLQALEIINERFAR 63
           +L+Q EID+LL  D           +G+ D           +V  ERL  LE++ +R  R
Sbjct: 38  VLNQDEIDSLLGFDQ--------GGAGDGDNSGIMALVNSALVNYERLPMLEVVFDRLVR 89

Query: 64  HFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPTNLNLIHLKPLRGTGLVVFSPSLV 123
                L N    + ++++  I    + ++  ++P+P  L++   +     GL+V   +L+
Sbjct: 90  MMSTSLRNFTSDNVEVSLDQISSVRFGDYLNSIPLPAMLSVFKAEEWDNYGLMVVDSALI 149

Query: 124 FIAVDNLFGG-DGRFPTKVEGREFTHTEQRVINRMLKLALEGYSDAWKAINPLEVEYVRS 182
           +  VD L GG  G    ++EGR +T  E+ ++ RM+ + L   S A+  ++P+   + R 
Sbjct: 150 YSIVDVLLGGRRGTAAMRIEGRPYTTIERNLVERMVHVVLSDLSAAFDPLSPVTFRFDRL 209

Query: 183 EMQVKFTNITTSPNDIVVNTPFHVEIGNLTGEFNICLPFSMIEPLRELLVNPPLENSRNE 242
           E   +F  I   P +  V     +++ +  G   + +P++ +EP+RELL+   +      
Sbjct: 210 ETNPRFATI-ARPANAAVLVKLRIDMEDRGGRLELMIPYATLEPVRELLLQMFMGEKFGR 268

Query: 243 DQNWRDNLVRQVQHSQLELVANFADISLRLSQILKLKPGD-VLPIEKPDRII-AHVDGVP 300
           D  W  +L  ++  + ++L A   ++++ L  +L  + G  +L    PD  I      V 
Sbjct: 269 DSIWETHLASELMVTDVDLSAVLDEVTMTLHDVLNWRVGTRILLNATPDGAIELRCGDVS 328

Query: 301 VLTSQYGTLNGQYALRIE 318
           +   + G   G  A+R+E
Sbjct: 329 MFQGRMGRKGGHIAVRLE 346