Pairwise Alignments

Query, 334 a.a., flagellar motor switch protein FliM from Escherichia coli ECRC100

Subject, 319 a.a., flagellar motor switch protein from Agrobacterium fabrum C58

 Score = 46.6 bits (109), Expect = 8e-10
 Identities = 32/123 (26%), Positives = 65/123 (52%), Gaps = 9/123 (7%)

Query: 206 VEIGNLTGEFNICLPFSMIEPLRELLVNPPLENSR--NEDQNWRDNLVRQVQHSQLELVA 263
           ++IG ++ EF++ +P     PL +  +  P  +++   + + W D + +QV+ SQ+ L A
Sbjct: 189 IDIGKVSSEFSLIVPQ---RPLLKTSIVAPKASAQALKKQEEWMDMISQQVKRSQVTLEA 245

Query: 264 NFADISLRLSQILKLKPGDVLPIE--KPDRIIAHV--DGVPVLTSQYGTLNGQYALRIEH 319
                +L L  I +L  GDV+P +  K D I   V  +G  +   ++G    +Y +R+++
Sbjct: 246 RIKLETLTLRTISRLVAGDVIPFQDLKQDDIGVEVSANGSKLYNCEFGKSGDRYMVRVKN 305

Query: 320 LIN 322
            ++
Sbjct: 306 NVS 308