Pairwise Alignments

Query, 571 a.a., hydrogenase 4 catalytic subunit HyfG from Escherichia coli ECRC100

Subject, 600 a.a., NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  160 bits (404), Expect = 2e-43
 Identities = 139/516 (26%), Positives = 230/516 (44%), Gaps = 69/516 (13%)

Query: 78  YYALSMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYGLIPVGLPDQRR 137
           Y+ +S+E      I++K  +  +    P+ T   P A W ERE  +M+G+   G P   R
Sbjct: 100 YHLISIERNRD--IMLKVALSENDLRVPTFTKLFPNANWYERETWEMFGIDIEGHPHLTR 157

Query: 138 LVLPDDWPEDMHPLRKD----AMDY-----------------RLRPEPT-----TDSETY 171
           +++P  W  + HPLRKD    A ++                   +PE       TD+E +
Sbjct: 158 IMMPQTW--EGHPLRKDYPARATEFDPFELTKAKQDLEMEALTFKPEDWGMKRGTDNEDF 215

Query: 172 PFINEGNSGARVIPVGPLHITSDEPGHFRLFVDGEQIVDADYRLFYVHRGMEKLAETRMG 231
            F+N          +GP H ++       L +DGE+IVD    + Y HRG EK+ E +  
Sbjct: 216 MFLN----------LGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYHHRGAEKMGERQSW 265

Query: 232 YNEVTFLSDRVCGICGFAHSVAYTNSVENALGIEVPQRAHTIRSILLEVERLHSHLLNLG 291
           ++ + + +DR+  + G  + + Y  +VE   GI VP R + IR +L E+ R++SHLL + 
Sbjct: 266 HSYIPY-TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIS 324

Query: 292 LSCHFVGFDTGFMQFFRVREKSMTMAELLTGSRKTYGLNLIGGVRRDILKEQRLQTLKLV 351
                VG  T     F  R+K   + E +TG R       IGGV  D+ +       + +
Sbjct: 325 TFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFL 384

Query: 352 REMRADVSELVEMLLATPNMEQRTQGIGILDRQIARDYSPVGPLIRGSGFARDLRFDHPY 411
             M   +    +  L    ++ R+QG+     + A ++   G  +R +G   D+R   PY
Sbjct: 385 EWMPKRLDSYEKAALRNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKWRPY 444

Query: 412 ADYGNIPKTLFTFTG-GDVFSRVMVRVKETFDSLAMLEFALDNMPDTP------------ 458
           + Y N    +    G  D ++RVM++V+E   SL +L+  LDNMP+ P            
Sbjct: 445 SGYENFDFEVPVGGGVSDCYTRVMLKVEELRQSLRILQQCLDNMPEGPFKADHPLTTPPP 504

Query: 459 ----------LLTEGFSYK-----PHAFALGFVEAPRGEDVHWSMLGDNQKLFRWRCRAA 503
                     L+T           P   +   VEA +G + ++     +   +R R R  
Sbjct: 505 KERTLQHIETLITHFLQVSWGPVMPAQESFQMVEATKGINSYYLTSDGSTMSYRTRVRTP 564

Query: 504 TYANWPVLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 539
           ++A+   +   +RG+ VSD  + +GS+D   S  DR
Sbjct: 565 SFAHLQQIPSAIRGSLVSDLIVYLGSIDFVMSDVDR 600