Pairwise Alignments

Query, 261 a.a., HTH-type transcriptional repressor CsqR from Escherichia coli ECRC100

Subject, 251 a.a., DeoR faimly transcriptional regulator from Pseudomonas simiae WCS417

 Score =  213 bits (543), Expect = 2e-60
 Identities = 103/245 (42%), Positives = 162/245 (66%), Gaps = 1/245 (0%)

Query: 10  PRHDQLLMLIAERGYMNIDELANLLDVSTQTVRRDIRKLSEQGLITRHHGGAGRASSVVN 69
           PR  Q+L L+ ERGY++I+E+A L  V+ QT+RRDI +L++  L+ R+HGGA   SSV N
Sbjct: 5   PRQQQILELVRERGYVSIEEMAQLFVVTPQTIRRDINQLADANLLRRYHGGAAYDSSVEN 64

Query: 70  TAFEQREVSQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARALLNHNHLRIITNSLR 129
           TA+  R     +EK+ I EA+A  IPD +++FI IGTT E +ARALLNHNHL+IITN+L 
Sbjct: 65  TAYAMRADQMRDEKQRIGEAIAAQIPDHASLFINIGTTTESIARALLNHNHLKIITNNLN 124

Query: 130 VAHILYHNPRFEVMVPGGTLRSHNSGIIGPSAASFVADFRADYLVTSVGAIESDGALMEF 189
           VA +L     F+V++ GG +R  + G++G ++  F+  F+ D+ +  +  I+ DG+L++F
Sbjct: 125 VATMLSAKDDFDVLLTGGNVR-RDGGVVGQASVDFINQFKVDFALVGISGIDEDGSLLDF 183

Query: 190 DVNEANVVKTMMAHARNILLVADHTKYHASAAVEIGNVAQVTALFTDELPPAALKSRLQD 249
           D  E  V + ++A+AR ++L AD +K+  +A + +G ++ V  L TD+ P  AL   L  
Sbjct: 184 DYQEVRVSQAIIANARQVILAADSSKFGRNAMIRLGPISLVDCLVTDQQPVPALVQLLNQ 243

Query: 250 SQIEI 254
            ++ +
Sbjct: 244 HKVRL 248