Pairwise Alignments

Query, 176 a.a., type 1 fimbria minor subunit FimF from Escherichia coli ECRC100

Subject, 171 a.a., putative fimbrial-like protein (VIMSS) from Escherichia coli BW25113

 Score = 87.4 bits (215), Expect = 1e-22
 Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 5/154 (3%)

Query: 22  AADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNA 81
           A D T+ I G  R N C +A +S    V L + +  +F++ G   P   F I L  CG  
Sbjct: 22  AHDGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFSH-GNYGPEKSFIINLQDCGTD 80

Query: 82  VSAVKVGFTGVADSHNANLLALENTVSAASGLGIQLLNEQQNQIPLNAPSSAISWTTLTP 141
           VS V V F+G  D   + +L++E+   AASGL I +L++ +  IPLN  S   S   L  
Sbjct: 81  VSTVDVTFSGTPDGVQSEMLSIESGTDAASGLAIAILDDAKILIPLNQASKDYS---LHS 137

Query: 142 GKPNTLNFYARLMATQVPVTAGHINATATFTLEY 175
           GK   L FYA+L      V +G +NA+ATF L Y
Sbjct: 138 GKV-PLTFYAQLRPVNSDVQSGKVNASATFVLHY 170