Pairwise Alignments

Query, 810 a.a., DEAD/DEAH box helicase from Escherichia coli ECRC100

Subject, 1137 a.a., DEAD/DEAH box helicase family protein from Serratia liquefaciens MT49

 Score =  131 bits (330), Expect = 2e-34
 Identities = 147/563 (26%), Positives = 234/563 (41%), Gaps = 79/563 (14%)

Query: 5   NLSNLTEADIITKCVMPAILNAGWD------NTTQIRQEVKLRDGKVIVRGKVAARRTVK 58
           ++ ++ EA+   + +   +L AGWD      NT  + QE  +++         A      
Sbjct: 199 DILSIDEAETRRRLIDSRLLAAGWDVGDELKNTDHVTQEHPVKEQPTSTGDGYA------ 252

Query: 59  SADIVLYHKPGIPLAVIEAKANKHEIGKGMQQGIEYARLLDV-----PFVFATNGDGFIF 113
             D VL+ +   PLAV+EAK       +G  Q   YA  L+      P +F TNG     
Sbjct: 253 --DYVLWDEAHKPLAVVEAKKASVSAEQGRIQARLYADWLEKEYGQRPVIFYTNGYDIWL 310

Query: 114 RDATAAEGECLEKQITLDDFPSPAELWQKFCLWKGYTQAQLPVITQDYYDDGSGKSP--R 171
            D     G    +        S   L Q+        + +LP+ +  +  D  GK+   R
Sbjct: 311 WDDNKTHGYPPRRIFGFYGKESLQYLIQQ-------RETRLPLNSIPHVKDNEGKAVAGR 363

Query: 172 YYQLQAINKTIEAVSNGQNRVLLVMATGTGKTYTAFQIIWRLWKSKNKKRILFLADRNIL 231
            YQL+ I +  E  +N   + L+V ATGTGKT  A  +   +  ++  KRILFL DR  L
Sbjct: 364 LYQLETIARVSERFTNKYRQSLIVQATGTGKTRVAIALSKLMIDARWVKRILFLCDRREL 423

Query: 232 VDQTKNNDFQPFGTAMTKVSGRTIDPAYE---IHLALYQAITGPEEDQKAFKQVAPDFFD 288
             Q   N F  F      V G++     +   I++A Y  +       K        +FD
Sbjct: 424 RKQAA-NAFNQFTNEPLYVVGKSKKEDRQNARIYIATYPGM------MKIMDHFDVGYFD 476

Query: 289 LIVIDECHRGSASEDSAWREILDYFSSATQIGLTATPKETHEVSSTDYFG----DPVYVY 344
           LI+ DE HR   S  + + ++  YF  A QIGLTATP +    ++   FG     P   Y
Sbjct: 477 LIIADESHR---SIYNVYGDVFKYF-DALQIGLTATPIDMVSKTTFGLFGCEGRIPTANY 532

Query: 345 SLKEGIEDGFLAPYKVVRVDIDVDLQGWRPTK----------------GQTDLNGEVIDD 388
           SL++ I D  L PY+VV    +   +G +  K                   +  G+ +D+
Sbjct: 533 SLEDAIADNNLVPYEVVTHTTEFLREGIKREKLSDQQIRELEDQGVDPNTLEFEGKSLDE 592

Query: 389 RIYNQKDFDRTMVIDERTELVARTITDYLKRTNPM--DKTIVFCNDIDHAERMRRALVNL 446
            IYN          D    ++   + + LK  +     KTI+F  +  HA  + +    +
Sbjct: 593 AIYNN---------DTNRHILRNLMENGLKDADGQLPGKTIIFARNHKHALLLNKLFDEM 643

Query: 447 NPEQVKKNDKYVMKITGDDEIGKAQLDNF---INPKKPYPVIATTSELMTTGVDAKTCKL 503
            P+       +   I   D   +  +D+F            +A + +++ TG+D      
Sbjct: 644 YPQFA---GHFCQVIDNYDPRAEQLIDDFKGLDESTNKELTLAISVDMLDTGIDVPEIVN 700

Query: 504 VVLDQNIQSMTKFKQIIGRGTRI 526
           +V  + ++S  KF Q+IGRGTR+
Sbjct: 701 LVFAKPVKSKVKFWQMIGRGTRL 723